The 2.0 version of rSNPBase

Variant report

Variant rs55995833
Chromosome Location chr2:11359424-11359425
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11296200-11412600 Weak transcription Aorta Aorta
2 chr2:11296800-11379800 Weak transcription Small Intestine intestine
3 chr2:11297600-11394400 Weak transcription Right Ventricle heart
4 chr2:11310600-11433000 Weak transcription Pancreas Pancrea
5 chr2:11314600-11364200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr2:11315800-11367400 Weak transcription Brain Cingulate Gyrus brain
7 chr2:11319000-11364200 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr2:11320800-11377000 Strong transcription HepG2 liver
9 chr2:11328800-11367600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr2:11329200-11364400 Strong transcription Liver Liver
11 chr2:11329200-11369200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr2:11333400-11386200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr2:11334400-11363600 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr2:11337000-11367400 Weak transcription Brain Angular Gyrus brain
15 chr2:11337600-11362600 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr2:11338400-11367400 Weak transcription H9 Cell Line embryonic stem cell
17 chr2:11338600-11373400 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr2:11339800-11360000 Weak transcription Spleen Spleen
19 chr2:11339800-11382600 Weak transcription Esophagus oesophagus
20 chr2:11340600-11369400 Weak transcription Colonic Mucosa Colon
21 chr2:11340800-11361200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr2:11341600-11384400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr2:11344400-11368400 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr2:11345000-11361600 Strong transcription Fetal Intestine Large intestine
25 chr2:11345200-11364400 Strong transcription Adipose Nuclei Adipose
26 chr2:11345400-11359600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr2:11346400-11364400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr2:11346400-11364400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
29 chr2:11346600-11361400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr2:11346800-11362000 Strong transcription HUES48 Cell Line embryonic stem cell
31 chr2:11346800-11362800 Strong transcription HUES64 Cell Line embryonic stem cell
32 chr2:11346800-11364600 Strong transcription Monocytes-CD14+_RO01746 blood
33 chr2:11346800-11366400 Strong transcription HSMM muscle
34 chr2:11347200-11361600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr2:11349000-11361600 Strong transcription Primary monocytes fromperipheralblood blood
36 chr2:11349000-11362000 Strong transcription Rectal Mucosa Donor 29 rectum
37 chr2:11349400-11362200 Strong transcription Placenta Placenta
38 chr2:11350200-11361000 Strong transcription iPS-20b Cell Line embryonic stem cell
39 chr2:11351200-11361200 Strong transcription Primary B cells from peripheral blood blood
40 chr2:11351200-11362200 Strong transcription Primary T helper cells fromperipheralblood blood
41 chr2:11351400-11361600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr2:11351800-11361000 Strong transcription Primary T regulatory cells fromperipheralblood blood
43 chr2:11351800-11361000 Strong transcription A549 lung
44 chr2:11351800-11361400 Strong transcription Cortex derived primary cultured neurospheres brain
45 chr2:11352000-11361800 Strong transcription Primary T cells fromperipheralblood blood
46 chr2:11352600-11361000 Strong transcription Primary neutrophils fromperipheralblood blood
47 chr2:11352600-11411200 Weak transcription Thymus Thymus
48 chr2:11352800-11361600 Strong transcription Dnd41 blood
49 chr2:11352800-11424000 Weak transcription HSMMtube muscle
50 chr2:11353200-11374800 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015