The 2.0 version of rSNPBase

Variant report

Variant rs56243142
Chromosome Location chr2:11333606-11333607
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11296200-11412600 Weak transcription Aorta Aorta
2 chr2:11296800-11379800 Weak transcription Small Intestine intestine
3 chr2:11297600-11394400 Weak transcription Right Ventricle heart
4 chr2:11299200-11357000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr2:11302400-11335600 Weak transcription Lung lung
6 chr2:11309800-11335600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr2:11310000-11337200 Weak transcription Ovary ovary
8 chr2:11310600-11433000 Weak transcription Pancreas Pancrea
9 chr2:11314600-11364200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr2:11315800-11335200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr2:11315800-11336200 Weak transcription Brain Anterior Caudate brain
12 chr2:11315800-11336400 Weak transcription GM12878-XiMat blood
13 chr2:11315800-11336600 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr2:11315800-11339000 Weak transcription Spleen Spleen
15 chr2:11315800-11340400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr2:11315800-11367400 Weak transcription Brain Cingulate Gyrus brain
17 chr2:11316000-11338000 Weak transcription Brain Substantia Nigra brain
18 chr2:11316200-11336200 Weak transcription Thymus Thymus
19 chr2:11316200-11344400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr2:11316200-11354200 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr2:11316400-11351800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr2:11316600-11339000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr2:11318600-11336200 Weak transcription Brain Angular Gyrus brain
24 chr2:11318600-11359200 Weak transcription Fetal Heart heart
25 chr2:11319000-11364200 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr2:11319400-11334000 Strong transcription Fetal Intestine Large intestine
27 chr2:11320800-11377000 Strong transcription HepG2 liver
28 chr2:11325000-11336800 Weak transcription H9 Cell Line embryonic stem cell
29 chr2:11325600-11341000 Weak transcription Brain Inferior Temporal Lobe brain
30 chr2:11325800-11334000 Strong transcription Breast Myoepithelial Primary Cells Breast
31 chr2:11326000-11356600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr2:11327200-11343400 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr2:11327600-11344400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr2:11327800-11344200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr2:11328000-11342600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr2:11328800-11342600 Strong transcription Rectal Mucosa Donor 29 rectum
37 chr2:11328800-11367600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr2:11329000-11333800 Strong transcription Cortex derived primary cultured neurospheres brain
39 chr2:11329000-11333800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr2:11329000-11334000 Strong transcription Adipose Nuclei Adipose
41 chr2:11329000-11334400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr2:11329000-11334400 Strong transcription Skeletal Muscle Female skeletal muscle
43 chr2:11329000-11334400 Strong transcription A549 lung
44 chr2:11329000-11342600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr2:11329000-11343200 Strong transcription NHDF-Ad bronchial
46 chr2:11329000-11343800 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr2:11329200-11334000 Strong transcription Primary B cells from peripheral blood blood
48 chr2:11329200-11334000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr2:11329200-11334200 Strong transcription HUES6 Cell Line embryonic stem cell
50 chr2:11329200-11334200 Strong transcription iPS-20b Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015