The 2.0 version of rSNPBase

Variant report

Variant rs13017010
Chromosome Location chr2:11409654-11409655
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11296200-11412600 Weak transcription Aorta Aorta
2 chr2:11310600-11433000 Weak transcription Pancreas Pancrea
3 chr2:11352600-11411200 Weak transcription Thymus Thymus
4 chr2:11352800-11424000 Weak transcription HSMMtube muscle
5 chr2:11354600-11423800 Weak transcription Brain Inferior Temporal Lobe brain
6 chr2:11361000-11410800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr2:11361000-11411200 Weak transcription Fetal Thymus thymus
8 chr2:11361000-11416600 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr2:11361200-11425600 Weak transcription Stomach Smooth Muscle stomach
10 chr2:11364400-11423800 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr2:11372600-11423800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr2:11376200-11410800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr2:11378800-11428600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr2:11382800-11410200 Weak transcription Primary B cells from cord blood blood
15 chr2:11383000-11424000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr2:11383200-11409800 Weak transcription Primary T cells from cord blood blood
17 chr2:11383400-11410400 Weak transcription Primary hematopoietic stem cells blood
18 chr2:11385000-11411000 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr2:11387800-11417400 Weak transcription Placenta Placenta
20 chr2:11388600-11411200 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr2:11389600-11411000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr2:11389800-11410800 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr2:11389800-11423800 Weak transcription Colonic Mucosa Colon
24 chr2:11391400-11410800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr2:11391400-11410800 Weak transcription NHLF lung
26 chr2:11391400-11411200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr2:11391400-11412600 Weak transcription Muscle Satellite Cultured Cells --
28 chr2:11391400-11423800 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr2:11391400-11423800 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr2:11391400-11423800 Weak transcription Ovary ovary
31 chr2:11391600-11411200 Weak transcription Osteobl bone
32 chr2:11391600-11414600 Weak transcription HUVEC blood vessel
33 chr2:11391600-11418000 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr2:11391600-11424000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr2:11391600-11424000 Weak transcription NHEK skin
36 chr2:11392400-11423800 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr2:11394600-11417600 Weak transcription Fetal Lung lung
38 chr2:11394800-11410600 Weak transcription A549 lung
39 chr2:11394800-11411000 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr2:11394800-11420400 Weak transcription Small Intestine intestine
41 chr2:11394800-11423800 Weak transcription Fetal Kidney kidney
42 chr2:11394800-11432800 Weak transcription Right Ventricle heart
43 chr2:11395400-11417400 Weak transcription Brain Germinal Matrix brain
44 chr2:11396400-11413200 Strong transcription HepG2 liver
45 chr2:11396600-11423800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr2:11397600-11410400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr2:11397600-11412600 Weak transcription Left Ventricle heart
48 chr2:11397600-11412600 Weak transcription Lung lung
49 chr2:11397600-11414800 Weak transcription GM12878-XiMat blood
50 chr2:11397600-11417400 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015