The 2.0 version of rSNPBase

Variant report

Variant rs6709947
Chromosome Location chr2:11465541-11465542
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11447200-11466200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr2:11448000-11465800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr2:11450600-11466600 Weak transcription NHLF lung
4 chr2:11451600-11467000 Weak transcription Primary B cells from cord blood blood
5 chr2:11451800-11466000 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr2:11452000-11466000 Weak transcription Small Intestine intestine
7 chr2:11454400-11469800 Weak transcription Fetal Brain Male brain
8 chr2:11454600-11466000 Weak transcription Brain Angular Gyrus brain
9 chr2:11455000-11469200 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr2:11455200-11466600 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr2:11456000-11469400 Weak transcription HSMM muscle
12 chr2:11456200-11466000 Weak transcription Brain Inferior Temporal Lobe brain
13 chr2:11456800-11466400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr2:11457200-11476400 Weak transcription Fetal Intestine Small intestine
15 chr2:11457400-11469800 Weak transcription Hela-S3 cervix
16 chr2:11459800-11469400 Weak transcription Rectal Smooth Muscle rectum
17 chr2:11460600-11469400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr2:11460800-11469800 Weak transcription Fetal Lung lung
19 chr2:11461000-11467200 Weak transcription Right Ventricle heart
20 chr2:11461000-11476400 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr2:11461200-11466000 Weak transcription Adipose Nuclei Adipose
22 chr2:11461200-11466000 Weak transcription Liver Liver
23 chr2:11461200-11466000 Weak transcription K562 blood
24 chr2:11461200-11469400 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr2:11461400-11466000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr2:11462400-11467600 Weak transcription Left Ventricle heart
27 chr2:11463000-11466600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr2:11463200-11466200 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr2:11464000-11466800 Weak transcription A549 lung
30 chr2:11464200-11466000 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr2:11464200-11467200 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr2:11464400-11466600 Weak transcription Psoas Muscle Psoas
33 chr2:11464400-11467200 Weak transcription Ovary ovary
34 chr2:11464400-11475200 Weak transcription Aorta Aorta
35 chr2:11464800-11466800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr2:11465000-11466000 Weak transcription Duodenum Mucosa Duodenum
37 chr2:11465200-11465600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
38 chr2:11465200-11466800 Genic enhancers HepG2 liver
39 chr2:11465200-11467800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr2:11465400-11466200 Enhancers Colon Smooth Muscle Colon
41 chr2:11465400-11466200 Enhancers Fetal Adrenal Gland Adrenal Gland
42 chr2:11465400-11466200 Enhancers NHDF-Ad bronchial
43 chr2:11465400-11466400 Weak transcription Primary T killer memory cells from peripheral blood blood
44 chr2:11465400-11466800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr2:11465400-11467200 Enhancers Right Atrium heart
46 chr2:11465400-11467800 Enhancers Brain Anterior Caudate brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015