The 2.0 version of rSNPBase

Variant report

Variant rs11891877
Chromosome Location chr2:11325331-11325332
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11296200-11329400 Weak transcription Gastric stomach
2 chr2:11296200-11412600 Weak transcription Aorta Aorta
3 chr2:11296800-11379800 Weak transcription Small Intestine intestine
4 chr2:11297600-11394400 Weak transcription Right Ventricle heart
5 chr2:11299200-11357000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr2:11301400-11330400 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr2:11302400-11326200 Weak transcription Fetal Muscle Trunk muscle
8 chr2:11302400-11335600 Weak transcription Lung lung
9 chr2:11304400-11326400 Weak transcription Colon Smooth Muscle Colon
10 chr2:11304400-11329200 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr2:11309800-11327200 Weak transcription K562 blood
12 chr2:11309800-11335600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr2:11310000-11337200 Weak transcription Ovary ovary
14 chr2:11310600-11433000 Weak transcription Pancreas Pancrea
15 chr2:11314600-11329600 Weak transcription Placenta Amnion Placenta Amnion
16 chr2:11314600-11332200 Weak transcription Colonic Mucosa Colon
17 chr2:11314600-11364200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr2:11315800-11326400 Weak transcription Primary T cells fromperipheralblood blood
19 chr2:11315800-11327400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr2:11315800-11329200 Weak transcription Primary B cells from peripheral blood blood
21 chr2:11315800-11335200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr2:11315800-11336200 Weak transcription Brain Anterior Caudate brain
23 chr2:11315800-11336400 Weak transcription GM12878-XiMat blood
24 chr2:11315800-11336600 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr2:11315800-11339000 Weak transcription Spleen Spleen
26 chr2:11315800-11340400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr2:11315800-11367400 Weak transcription Brain Cingulate Gyrus brain
28 chr2:11316000-11326400 Weak transcription HSMMtube muscle
29 chr2:11316000-11331200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr2:11316000-11332200 Weak transcription Psoas Muscle Psoas
31 chr2:11316000-11338000 Weak transcription Brain Substantia Nigra brain
32 chr2:11316200-11329000 Weak transcription NHEK skin
33 chr2:11316200-11331200 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr2:11316200-11332600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr2:11316200-11333000 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr2:11316200-11336200 Weak transcription Thymus Thymus
37 chr2:11316200-11344400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr2:11316200-11354200 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr2:11316400-11327400 Weak transcription Primary neutrophils fromperipheralblood blood
40 chr2:11316400-11351800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr2:11316600-11327200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr2:11316600-11329000 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr2:11316600-11339000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr2:11317800-11332200 Weak transcription ES-WA7 Cell Line embryonic stem cell
45 chr2:11317800-11333000 Weak transcription Fetal Brain Male brain
46 chr2:11318400-11327000 Strong transcription NHDF-Ad bronchial
47 chr2:11318400-11327800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr2:11318400-11332600 Weak transcription Rectal Smooth Muscle rectum
49 chr2:11318600-11330600 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr2:11318600-11336200 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015