Variant report

Variant rs56004216
Chromosome Location chr2:63150360-63150361
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:63122800-63166600 Weak transcription HMEC breast
2 chr2:63142400-63190800 Weak transcription Brain Angular Gyrus brain
3 chr2:63145000-63155400 Weak transcription HUVEC blood vessel
4 chr2:63145600-63152200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr2:63147000-63151200 Strong transcription Liver Liver
6 chr2:63147200-63151000 Weak transcription NH-A brain
7 chr2:63147200-63152000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr2:63147800-63151400 ZNF genes & repeats Fetal Intestine Small intestine
9 chr2:63147800-63151400 ZNF genes & repeats Fetal Stomach stomach
10 chr2:63147800-63154200 Weak transcription K562 blood
11 chr2:63148000-63150600 Strong transcription HepG2 liver
12 chr2:63148000-63151600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr2:63148400-63150800 Strong transcription Adipose Nuclei Adipose
14 chr2:63148400-63151000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr2:63148400-63151200 ZNF genes & repeats Fetal Brain Female brain
16 chr2:63148600-63150400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr2:63148600-63150800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr2:63148600-63151200 Strong transcription Duodenum Smooth Muscle Duodenum
19 chr2:63148600-63151400 ZNF genes & repeats Primary hematopoietic stem cells blood
20 chr2:63148800-63150600 Weak transcription Brain Inferior Temporal Lobe brain
21 chr2:63148800-63150600 Strong transcription Fetal Intestine Large intestine
22 chr2:63148800-63151400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr2:63148800-63151400 Strong transcription A549 lung
24 chr2:63148800-63152000 Weak transcription Brain Cingulate Gyrus brain
25 chr2:63149000-63150600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr2:63149000-63150800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr2:63149000-63151400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr2:63149000-63151400 Weak transcription Duodenum Mucosa Duodenum
29 chr2:63149200-63151200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr2:63149400-63150600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr2:63149400-63150600 Strong transcription Placenta Amnion Placenta Amnion
32 chr2:63149400-63150800 Strong transcription Right Ventricle heart
33 chr2:63149400-63151000 Strong transcription Left Ventricle heart
34 chr2:63149400-63151200 Strong transcription Ovary ovary
35 chr2:63149400-63151200 Strong transcription Rectal Mucosa Donor 29 rectum
36 chr2:63149400-63151400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
37 chr2:63149400-63151400 ZNF genes & repeats Brain Germinal Matrix brain
38 chr2:63149400-63151400 ZNF genes & repeats Dnd41 blood
39 chr2:63149400-63152200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
40 chr2:63149400-63152400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
41 chr2:63149600-63150600 Strong transcription NHDF-Ad bronchial
42 chr2:63149600-63150800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr2:63149600-63151400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
44 chr2:63149600-63151400 ZNF genes & repeats Fetal Lung lung
45 chr2:63149600-63151400 ZNF genes & repeats Fetal Muscle Trunk muscle
46 chr2:63149600-63151400 Strong transcription Stomach Smooth Muscle stomach
47 chr2:63149800-63150400 ZNF genes & repeats Fetal Heart heart
48 chr2:63149800-63150400 ZNF genes & repeats Fetal Kidney kidney
49 chr2:63149800-63150600 Strong transcription H9 Cell Line embryonic stem cell
50 chr2:63149800-63150600 Strong transcription Breast Myoepithelial Primary Cells Breast

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