The 2.0 version of rSNPBase

Variant report

Variant rs72888957
Chromosome Location chr2:63036139-63036140
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:63017000-63037400 Weak transcription NHLF lung
2 chr2:63017400-63049400 Weak transcription Fetal Heart heart
3 chr2:63019600-63043400 Weak transcription Brain Angular Gyrus brain
4 chr2:63020600-63082000 Weak transcription Pancreas Pancrea
5 chr2:63020800-63040200 Weak transcription Left Ventricle heart
6 chr2:63022400-63040400 Weak transcription NHEK skin
7 chr2:63022400-63041000 Weak transcription HSMM muscle
8 chr2:63023800-63049000 Weak transcription Rectal Smooth Muscle rectum
9 chr2:63028000-63037600 Weak transcription Colon Smooth Muscle Colon
10 chr2:63028600-63063400 Weak transcription Brain Substantia Nigra brain
11 chr2:63029600-63040600 Weak transcription HMEC breast
12 chr2:63031000-63083000 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr2:63031400-63082000 Weak transcription Thymus Thymus
14 chr2:63031600-63040800 Weak transcription NH-A brain
15 chr2:63031600-63053800 Weak transcription Monocytes-CD14+_RO01746 blood
16 chr2:63032000-63040200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr2:63032600-63036600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr2:63033000-63037400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr2:63033400-63040200 Weak transcription Esophagus oesophagus
20 chr2:63033800-63039000 Weak transcription Ovary ovary
21 chr2:63033800-63040200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr2:63033800-63040200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr2:63033800-63040400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr2:63033800-63040600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr2:63033800-63052800 Weak transcription Primary T cells from cord blood blood
26 chr2:63033800-63060600 Weak transcription Aorta Aorta
27 chr2:63034000-63040200 Weak transcription Fetal Muscle Trunk muscle
28 chr2:63034200-63036400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr2:63034200-63037400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr2:63034200-63037400 Weak transcription HepG2 liver
31 chr2:63034200-63038800 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr2:63034400-63037600 Weak transcription Muscle Satellite Cultured Cells --
33 chr2:63034400-63037600 Weak transcription Osteobl bone
34 chr2:63034400-63040000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr2:63034400-63040200 Weak transcription A549 lung
36 chr2:63034400-63040400 Weak transcription Adipose Nuclei Adipose
37 chr2:63034400-63054000 Weak transcription Stomach Smooth Muscle stomach
38 chr2:63034600-63040000 Weak transcription Liver Liver
39 chr2:63035000-63036600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr2:63035200-63045400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr2:63035200-63053000 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr2:63035400-63037400 Weak transcription NHDF-Ad bronchial
43 chr2:63035400-63040800 Weak transcription Fetal Intestine Small intestine
44 chr2:63035400-63041200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr2:63035800-63036200 Enhancers HUVEC blood vessel
46 chr2:63035800-63040400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr2:63036000-63036200 Enhancers Primary hematopoietic stem cells short term culture blood
48 chr2:63036000-63036200 Flanking Active TSS Dnd41 blood
49 chr2:63036000-63041600 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015