The 2.0 version of rSNPBase

Variant report

Variant rs56057685
Chromosome Location chr6:143510517-143510518
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143444600-143516400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:143453000-143510600 Weak transcription Brain Inferior Temporal Lobe brain
3 chr6:143458800-143529200 Weak transcription Primary T cells from cord blood blood
4 chr6:143479600-143534600 Weak transcription Gastric stomach
5 chr6:143482400-143511200 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr6:143484400-143519800 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr6:143487000-143516600 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr6:143487600-143518000 Weak transcription Fetal Kidney kidney
9 chr6:143497400-143518600 Weak transcription Pancreas Pancrea
10 chr6:143497800-143522800 Weak transcription Fetal Muscle Trunk muscle
11 chr6:143498000-143511000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr6:143498000-143517800 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr6:143498000-143526000 Weak transcription Duodenum Mucosa Duodenum
14 chr6:143499200-143525400 Weak transcription Esophagus oesophagus
15 chr6:143499200-143534600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr6:143499400-143516800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr6:143499400-143520800 Weak transcription Lung lung
18 chr6:143500400-143515800 Strong transcription K562 blood
19 chr6:143501400-143516600 Weak transcription Psoas Muscle Psoas
20 chr6:143501400-143534800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr6:143501600-143511000 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr6:143501600-143516400 Strong transcription Liver Liver
23 chr6:143502200-143517000 Weak transcription Brain Cingulate Gyrus brain
24 chr6:143504800-143521800 Weak transcription Brain Substantia Nigra brain
25 chr6:143505000-143512800 Weak transcription NHEK skin
26 chr6:143505200-143512800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr6:143505400-143511400 Strong transcription HepG2 liver
28 chr6:143505400-143511800 Strong transcription Fetal Intestine Large intestine
29 chr6:143505400-143513800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr6:143505600-143534600 Weak transcription H9 Cell Line embryonic stem cell
31 chr6:143505800-143515800 Weak transcription Brain Hippocampus Middle brain
32 chr6:143506600-143518400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr6:143506800-143516600 Weak transcription Left Ventricle heart
34 chr6:143507000-143510600 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr6:143507000-143517600 Weak transcription Colonic Mucosa Colon
36 chr6:143507200-143511400 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr6:143509000-143513600 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr6:143509000-143516800 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr6:143509000-143518800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr6:143509200-143511000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr6:143509600-143510600 Weak transcription Osteobl bone
42 chr6:143509600-143511200 Strong transcription Fetal Intestine Small intestine
43 chr6:143509600-143516600 Weak transcription Ovary ovary
44 chr6:143509600-143517600 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr6:143509600-143517800 Weak transcription Fetal Lung lung
46 chr6:143509600-143518000 Weak transcription NH-A brain
47 chr6:143509600-143523200 Weak transcription Adipose Nuclei Adipose
48 chr6:143509600-143524400 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr6:143509800-143510800 Weak transcription NHDF-Ad bronchial
50 chr6:143509800-143519800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015