Variant report
| Variant | rs56067623 |
|---|---|
| Chromosome Location | chr11:106752064-106752065 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr11:106751125..106753536-chr11:106754192..106756756,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:27)
| rs_ID | r2[population] |
|---|---|
| rs10502075 | 1.00[ASN][1000 genomes] |
| rs10890565 | 1.00[ASN][1000 genomes] |
| rs11211852 | 1.00[ASN][1000 genomes] |
| rs11211853 | 1.00[ASN][1000 genomes] |
| rs11211854 | 1.00[ASN][1000 genomes] |
| rs11211856 | 1.00[ASN][1000 genomes] |
| rs11211860 | 1.00[ASN][1000 genomes] |
| rs11211861 | 1.00[ASN][1000 genomes] |
| rs11211863 | 1.00[ASN][1000 genomes] |
| rs11211864 | 1.00[ASN][1000 genomes] |
| rs11211865 | 1.00[ASN][1000 genomes] |
| rs11211866 | 1.00[ASN][1000 genomes] |
| rs11211869 | 1.00[ASN][1000 genomes] |
| rs12360850 | 1.00[ASN][1000 genomes] |
| rs12362289 | 1.00[ASN][1000 genomes] |
| rs12365648 | 1.00[ASN][1000 genomes] |
| rs17563648 | 1.00[ASN][1000 genomes] |
| rs17563662 | 1.00[ASN][1000 genomes] |
| rs17649054 | 1.00[ASN][1000 genomes] |
| rs61903143 | 1.00[ASN][1000 genomes] |
| rs61903144 | 1.00[ASN][1000 genomes] |
| rs61903145 | 1.00[ASN][1000 genomes] |
| rs61903146 | 1.00[ASN][1000 genomes] |
| rs61903149 | 1.00[ASN][1000 genomes] |
| rs61903150 | 1.00[ASN][1000 genomes] |
| rs61903152 | 1.00[ASN][1000 genomes] |
| rs9645655 | 1.00[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv898362 | chr11:106715879-106809457 | ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
| 2 | nsv1036990 | chr11:106718613-106774766 | Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
| 3 | nsv541162 | chr11:106718613-106774766 | Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
| 4 | nsv556231 | chr11:106737224-106815963 | Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:106746000-106752800 | Weak transcription | Fetal Lung | lung |
