The 2.0 version of rSNPBase

Variant report

Variant rs56072007
Chromosome Location chr10:93980225-93980226
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:93926800-93982400 Weak transcription HSMMtube muscle
2 chr10:93927200-93980400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr10:93927400-93997800 Weak transcription Fetal Intestine Large intestine
4 chr10:93929200-93984800 Weak transcription Fetal Intestine Small intestine
5 chr10:93958400-93981000 Weak transcription Psoas Muscle Psoas
6 chr10:93959000-93985800 Weak transcription Brain Substantia Nigra brain
7 chr10:93961000-93990800 Weak transcription Spleen Spleen
8 chr10:93964200-93993000 Weak transcription Fetal Brain Female brain
9 chr10:93964200-93996000 Weak transcription Brain Germinal Matrix brain
10 chr10:93964200-93997600 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr10:93964400-93982400 Weak transcription HSMM muscle
12 chr10:93966400-93986200 Weak transcription Ovary ovary
13 chr10:93967400-93986200 Weak transcription Fetal Heart heart
14 chr10:93967600-93986200 Weak transcription Left Ventricle heart
15 chr10:93967600-93990800 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr10:93968400-93997000 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr10:93968600-93989200 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr10:93969200-93982400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr10:93969200-93997800 Weak transcription Pancreas Pancrea
20 chr10:93969200-93998600 Weak transcription Lung lung
21 chr10:93969600-93997800 Weak transcription Esophagus oesophagus
22 chr10:93971000-93990800 Weak transcription Duodenum Mucosa Duodenum
23 chr10:93971200-93980400 Weak transcription Brain Cingulate Gyrus brain
24 chr10:93971200-93982600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr10:93971200-93984200 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr10:93971200-93990400 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr10:93971400-93980400 Weak transcription Brain Angular Gyrus brain
28 chr10:93971400-93982400 Weak transcription Muscle Satellite Cultured Cells --
29 chr10:93971400-93982600 Weak transcription Osteobl bone
30 chr10:93971400-93993200 Weak transcription Fetal Muscle Leg muscle
31 chr10:93971400-93997800 Weak transcription Stomach Mucosa stomach
32 chr10:93971600-93980600 Weak transcription Brain Inferior Temporal Lobe brain
33 chr10:93971600-93982000 Weak transcription HMEC breast
34 chr10:93971600-93982400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr10:93971600-93988000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr10:93971600-93989000 Weak transcription Primary B cells from peripheral blood blood
37 chr10:93971600-93997000 Weak transcription Adipose Nuclei Adipose
38 chr10:93973000-93982200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr10:93973000-93997000 Weak transcription Liver Liver
40 chr10:93974800-93991600 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr10:93975400-93998000 Weak transcription Colonic Mucosa Colon
42 chr10:93975600-93997000 Weak transcription HepG2 liver
43 chr10:93976600-93980400 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr10:93976600-93999000 Weak transcription Aorta Aorta
45 chr10:93976800-93980400 Weak transcription Brain Hippocampus Middle brain
46 chr10:93976800-93984000 Weak transcription Brain Anterior Caudate brain
47 chr10:93976800-93989000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr10:93976800-93989400 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr10:93976800-93990600 Weak transcription Right Ventricle heart
50 chr10:93976800-93997200 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015