The 2.0 version of rSNPBase

Variant report

Variant rs56078645
Chromosome Location chr6:133083539-133083540
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:133061400-133098000 Weak transcription Spleen Spleen
2 chr6:133065000-133098000 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr6:133072800-133084400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr6:133072800-133084800 Weak transcription Stomach Mucosa stomach
5 chr6:133075800-133083600 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr6:133079000-133083600 Weak transcription Primary hematopoietic stem cells blood
7 chr6:133079000-133083800 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr6:133079000-133084800 Weak transcription Liver Liver
9 chr6:133079000-133085000 Weak transcription A549 lung
10 chr6:133080400-133085000 Weak transcription Adipose Nuclei Adipose
11 chr6:133080400-133085200 Weak transcription Right Atrium heart
12 chr6:133081400-133084600 Weak transcription Fetal Stomach stomach
13 chr6:133081400-133096800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr6:133081600-133084400 Weak transcription Placenta Placenta
15 chr6:133081800-133086800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr6:133082400-133083600 Enhancers Primary monocytes fromperipheralblood blood
17 chr6:133082400-133083800 Enhancers Primary T helper naive cells fromperipheralblood blood
18 chr6:133082600-133083600 Enhancers Primary neutrophils fromperipheralblood blood
19 chr6:133082600-133083600 Enhancers Primary B cells from peripheral blood blood
20 chr6:133082600-133083600 Enhancers Primary T cells fromperipheralblood blood
21 chr6:133082800-133083600 Enhancers Primary T helper cells fromperipheralblood blood
22 chr6:133083000-133083600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr6:133083000-133083800 Enhancers Primary T killer memory cells from peripheral blood blood
24 chr6:133083000-133084000 Flanking Active TSS GM12878-XiMat blood
25 chr6:133083200-133083600 Enhancers Primary hematopoietic stem cells short term culture blood
26 chr6:133083200-133083600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
27 chr6:133083200-133083600 Enhancers Thymus Thymus
28 chr6:133083200-133083800 Enhancers Primary T cells from cord blood blood
29 chr6:133083200-133084000 Enhancers Primary Natural Killer cells fromperipheralblood blood
30 chr6:133083200-133084000 Enhancers Primary mononuclear cells fromperipheralblood Blood
31 chr6:133083200-133084400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr6:133083200-133085000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
33 chr6:133083200-133085000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
34 chr6:133083200-133085400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
35 chr6:133083200-133085800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
36 chr6:133083200-133086000 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr6:133083200-133086600 Enhancers Fetal Intestine Large intestine
38 chr6:133083400-133084000 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
39 chr6:133083400-133084000 Enhancers Fetal Intestine Small intestine
40 chr6:133083400-133084400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr6:133083400-133084800 Flanking Active TSS Primary B cells from cord blood blood
42 chr6:133083400-133090600 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015