Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10169851	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10188404	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs13408935	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13419696	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs13426139	0.80[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs28419312	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4322873	0.87[EUR][1000 genomes]
rs4852413	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4853268	0.88[EUR][1000 genomes]
rs4853269	0.88[EUR][1000 genomes]
rs55674026	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs55952208	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs56078403	0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs57842923	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs58134863	0.81[AMR][1000 genomes]
rs58242146	0.81[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs61283380	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7584590	0.80[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs7598235	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs971120	0.83[AMR][1000 genomes];0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv582235	chr2:76881210-76997763	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv874319	chr2:76949101-76979415	Weak transcription Enhancers Active TSS Strong transcription Genic enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:76957800-76958400	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr2:76957800-76958400	Enhancers	H9 Cell Line	embryonic stem cell
3	chr2:76958000-76958600	Enhancers	HUES48 Cell Line	embryonic stem cell

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