Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10169851	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10181947	0.82[EUR][1000 genomes]
rs10188404	0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs11682401	0.82[EUR][1000 genomes]
rs12713879	0.82[EUR][1000 genomes]
rs13406374	0.83[EUR][1000 genomes]
rs13408935	0.87[ASN][1000 genomes]
rs13419696	0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs13426139	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2056210	0.80[EUR][1000 genomes]
rs2056211	0.82[EUR][1000 genomes]
rs28419312	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4322873	0.93[ASN][1000 genomes]
rs4852413	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4853268	0.93[ASN][1000 genomes]
rs4853269	0.93[ASN][1000 genomes]
rs55674026	0.82[ASN][1000 genomes]
rs56078403	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56083799	0.80[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs57842923	0.82[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs58242146	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61283380	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7584499	0.84[EUR][1000 genomes]
rs7585902	0.83[EUR][1000 genomes]
rs7598235	0.81[AMR][1000 genomes]
rs971120	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs971121	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv582235	chr2:76881210-76997763	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv874319	chr2:76949101-76979415	Weak transcription Enhancers Active TSS Strong transcription Genic enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:76960800-76963000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr2:76960800-76974600	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr2:76961200-76963200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr2:76961600-76963200	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr2:76961600-76967200	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr2:76961800-76964600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell

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