Variant report

Variant	rs56087197
Chromosome Location	chr1:211227221-211227222
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10863875	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11119671	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11119672	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11119674	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12127815	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1832430	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4072301	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4364937	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4486506	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6540652	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211182800-211228600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr1:211210800-211228600	Weak transcription	Brain Hippocampus Middle	brain
3	chr1:211221000-211228400	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr1:211222800-211228800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr1:211224600-211242200	Weak transcription	A549	lung
6	chr1:211225800-211232400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr1:211227200-211228600	Weak transcription	HSMM	muscle
8	chr1:211227200-211229200	Weak transcription	HSMMtube	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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