Variant report

Variant rs561213927
Chromosome Location chr9:518734-518735
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:506000-520000 Weak transcription Aorta Aorta
2 chr9:506000-520200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr9:506400-519600 Weak transcription Colon Smooth Muscle Colon
4 chr9:507000-532600 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr9:508400-522400 Weak transcription Fetal Muscle Leg muscle
6 chr9:512400-522400 Weak transcription Right Ventricle heart
7 chr9:513400-520800 Weak transcription Fetal Lung lung
8 chr9:513400-521000 Weak transcription Brain Substantia Nigra brain
9 chr9:513400-522400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr9:513600-522800 Weak transcription Brain Cingulate Gyrus brain
11 chr9:514000-532200 Weak transcription Fetal Muscle Trunk muscle
12 chr9:514800-519400 Enhancers Primary T killer memory cells from peripheral blood blood
13 chr9:516000-521400 Enhancers Primary T helper cells PMA-I stimulated --
14 chr9:516200-520800 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr9:516600-518800 Enhancers Left Ventricle heart
16 chr9:516800-518800 Enhancers Pancreas Pancrea
17 chr9:517000-522400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr9:517400-520600 Weak transcription Brain Inferior Temporal Lobe brain
19 chr9:517400-522200 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr9:517600-519000 Enhancers Fetal Intestine Small intestine
21 chr9:517600-519400 Enhancers Fetal Intestine Large intestine
22 chr9:517600-520800 Weak transcription Brain Hippocampus Middle brain
23 chr9:517800-520000 Enhancers Primary T cells from cord blood blood
24 chr9:518000-518800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr9:518000-522000 Weak transcription Colonic Mucosa Colon
26 chr9:518000-522400 Weak transcription Lung lung
27 chr9:518200-518800 Enhancers Placenta Amnion Placenta Amnion
28 chr9:518200-518800 Enhancers HMEC breast
29 chr9:518200-519000 Enhancers Primary hematopoietic stem cells blood
30 chr9:518200-519000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr9:518200-519400 Enhancers Right Atrium heart
32 chr9:518200-522400 Enhancers Fetal Heart heart
33 chr9:518400-518800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
34 chr9:518400-518800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
35 chr9:518400-518800 Active TSS Duodenum Mucosa Duodenum
36 chr9:518400-518800 Genic enhancers A549 lung
37 chr9:518400-519000 Enhancers Small Intestine intestine
38 chr9:518400-519000 Enhancers HepG2 liver
39 chr9:518400-519200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr9:518400-519400 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr9:518400-519600 Enhancers Brain Anterior Caudate brain
42 chr9:518600-518800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr9:518600-518800 Enhancers NHEK skin
44 chr9:518600-519000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
45 chr9:518600-519000 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr9:518600-519200 Enhancers Placenta Placenta
47 chr9:518600-519400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr9:518600-520000 Enhancers Stomach Mucosa stomach
49 chr9:518600-522400 Weak transcription Fetal Kidney kidney
50 chr9:518600-522400 Weak transcription Stomach Smooth Muscle stomach

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