| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
esv2752678 |
chrX:55930768-56851953 |
Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
20 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
esv2753382 |
chrX:55930768-56851953 |
Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
20 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
esv2754448 |
chrX:55930768-56851953 |
ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' Enhancers Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
20 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
esv2755974 |
chrX:55930768-56851953 |
Strong transcription Enhancers Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
20 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv432333 |
chrX:55930768-56851953 |
Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
20 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
esv2756104 |
chrX:56292362-56824154 |
Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
12 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv534648 |
chrX:56306570-56395419 |
Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
esv3392306 |
chrX:56342980-56430729 |
Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 9 |
esv3350483 |
chrX:56342980-56445360 |
Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
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Last update: Aug 31, 2015