Variant report

Variant rs561296
Chromosome Location chr6:49295461-49295462
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:49293600-49295800 Enhancers HSMM muscle
2 chr6:49293600-49296200 Enhancers Fetal Lung lung
3 chr6:49293800-49295600 Enhancers NHLF lung
4 chr6:49294000-49295800 Enhancers NHEK skin
5 chr6:49294000-49296200 Enhancers HUVEC blood vessel
6 chr6:49294200-49295600 Weak transcription Fetal Brain Male brain
7 chr6:49294200-49295800 Enhancers NHDF-Ad bronchial
8 chr6:49294200-49296400 Enhancers Rectal Smooth Muscle rectum
9 chr6:49294800-49296200 Enhancers Stomach Smooth Muscle stomach
10 chr6:49295000-49295600 Enhancers Duodenum Smooth Muscle Duodenum
11 chr6:49295000-49295800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
12 chr6:49295000-49296000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
13 chr6:49295000-49310200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr6:49295200-49295800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr6:49295200-49296000 Enhancers Muscle Satellite Cultured Cells --
16 chr6:49295200-49296000 Enhancers Aorta Aorta
17 chr6:49295200-49296200 Enhancers Colon Smooth Muscle Colon
18 chr6:49295200-49296200 Enhancers Osteobl bone
19 chr6:49295200-49296600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr6:49295400-49296200 Enhancers iPS-18 Cell Line embryonic stem cell
21 chr6:49295400-49300800 Weak transcription HMEC breast
22 chr6:49295400-49304200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr6:49295400-49309400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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