Variant report
| Variant | rs56134339 |
|---|---|
| Chromosome Location | chr3:56821318-56821319 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:56807000-56833200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 2 | chr3:56810000-56822200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 3 | chr3:56814600-56826800 | Enhancers | Primary mononuclear cells fromperipheralblood | Blood |
| 4 | chr3:56814800-56826600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 5 | chr3:56815600-56823400 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 6 | chr3:56815800-56824200 | Enhancers | Fetal Heart | heart |
| 7 | chr3:56816000-56825400 | Enhancers | Primary B cells from peripheral blood | blood |
| 8 | chr3:56816200-56827000 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 9 | chr3:56816600-56823200 | Enhancers | Brain Germinal Matrix | brain |
| 10 | chr3:56817000-56823600 | Enhancers | Brain Cingulate Gyrus | brain |
| 11 | chr3:56818000-56827000 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 12 | chr3:56818200-56826800 | Enhancers | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 13 | chr3:56818200-56829400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 14 | chr3:56818400-56821400 | Weak transcription | Adipose Nuclei | Adipose |
| 15 | chr3:56818400-56822000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 16 | chr3:56818600-56821800 | Weak transcription | Fetal Stomach | stomach |
| 17 | chr3:56818600-56822200 | Weak transcription | Esophagus | oesophagus |
| 18 | chr3:56818600-56824000 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 19 | chr3:56818600-56824200 | Enhancers | Primary T cells from cord blood | blood |
| 20 | chr3:56818600-56826200 | Enhancers | Primary T helper cells fromperipheralblood | blood |
| 21 | chr3:56818600-56829000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 22 | chr3:56818600-56832000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 23 | chr3:56818800-56821400 | Weak transcription | Small Intestine | intestine |
| 24 | chr3:56818800-56822200 | Weak transcription | Colonic Mucosa | Colon |
| 25 | chr3:56818800-56822200 | Weak transcription | Colon Smooth Muscle | Colon |
| 26 | chr3:56818800-56822200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 27 | chr3:56818800-56822600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 28 | chr3:56819000-56829000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 29 | chr3:56819000-56830400 | Weak transcription | HSMM | muscle |
| 30 | chr3:56819200-56821400 | Enhancers | GM12878-XiMat | blood |
| 31 | chr3:56819200-56822600 | Weak transcription | Stomach Mucosa | stomach |
| 32 | chr3:56819200-56824200 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 33 | chr3:56819200-56824400 | Weak transcription | Gastric | stomach |
| 34 | chr3:56819200-56834400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 35 | chr3:56819400-56821400 | Weak transcription | Primary B cells from cord blood | blood |
| 36 | chr3:56819400-56822000 | Weak transcription | HSMMtube | muscle |
| 37 | chr3:56819400-56822400 | Genic enhancers | Fetal Thymus | thymus |
| 38 | chr3:56819600-56821400 | Weak transcription | Right Atrium | heart |
| 39 | chr3:56819600-56821400 | Weak transcription | Right Ventricle | heart |
| 40 | chr3:56819600-56821800 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 41 | chr3:56819600-56821800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 42 | chr3:56819600-56822800 | Enhancers | Monocytes-CD14+_RO01746 | blood |
| 43 | chr3:56819600-56829000 | Weak transcription | Placenta | Placenta |
| 44 | chr3:56819800-56821400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 45 | chr3:56819800-56821600 | Enhancers | Primary T regulatory cells fromperipheralblood | blood |
| 46 | chr3:56819800-56821800 | Weak transcription | NHEK | skin |
| 47 | chr3:56819800-56828000 | Enhancers | Primary T cells fromperipheralblood | blood |
| 48 | chr3:56820000-56821600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 49 | chr3:56820000-56821800 | Weak transcription | HMEC | breast |
| 50 | chr3:56820000-56823800 | Genic enhancers | Dnd41 | blood |
