Variant report

Variant rs56134416
Chromosome Location chr3:52678531-52678532
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52587200-52719200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr3:52591000-52688000 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr3:52592200-52719200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr3:52634800-52686000 Strong transcription Duodenum Mucosa Duodenum
5 chr3:52636000-52703800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr3:52636000-52704000 Strong transcription Placenta Placenta
7 chr3:52636200-52703200 Strong transcription Primary monocytes fromperipheralblood blood
8 chr3:52636800-52703600 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr3:52637200-52715800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr3:52640800-52684600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr3:52642600-52711200 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr3:52643400-52691200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr3:52643800-52682800 Weak transcription K562 blood
14 chr3:52650000-52712200 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr3:52655200-52716400 Strong transcription Fetal Thymus thymus
16 chr3:52655600-52680200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
17 chr3:52655600-52680200 Strong transcription Fetal Muscle Leg muscle
18 chr3:52655800-52684600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr3:52655800-52697600 Strong transcription Primary T cells fromperipheralblood blood
20 chr3:52655800-52704000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr3:52656000-52683200 Strong transcription Adipose Nuclei Adipose
22 chr3:52656600-52680200 Strong transcription Fetal Muscle Trunk muscle
23 chr3:52656600-52704600 Strong transcription Primary T helper cells fromperipheralblood blood
24 chr3:52657000-52697200 Strong transcription Liver Liver
25 chr3:52657000-52697600 Strong transcription HUES64 Cell Line embryonic stem cell
26 chr3:52658000-52702800 Strong transcription Primary T regulatory cells fromperipheralblood blood
27 chr3:52660800-52704800 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr3:52664400-52679800 Strong transcription Brain Germinal Matrix brain
29 chr3:52664600-52701600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr3:52665400-52719200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr3:52666200-52702400 Strong transcription Primary neutrophils fromperipheralblood blood
32 chr3:52666400-52679000 Strong transcription Fetal Intestine Small intestine
33 chr3:52666600-52683200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr3:52667800-52679800 Strong transcription Fetal Stomach stomach
35 chr3:52670200-52679800 Strong transcription Cortex derived primary cultured neurospheres brain
36 chr3:52670400-52704600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
37 chr3:52670800-52679800 Strong transcription Primary T helper naive cells fromperipheralblood blood
38 chr3:52670800-52680000 Strong transcription Skeletal Muscle Male skeletal muscle
39 chr3:52670800-52682200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr3:52670800-52682800 Strong transcription Osteobl bone
41 chr3:52670800-52686000 Strong transcription iPS-20b Cell Line embryonic stem cell
42 chr3:52670800-52686200 Strong transcription HUES48 Cell Line embryonic stem cell
43 chr3:52670800-52715400 Strong transcription Dnd41 blood
44 chr3:52671000-52679800 Strong transcription Brain Anterior Caudate brain
45 chr3:52671000-52679800 Strong transcription Fetal Intestine Large intestine
46 chr3:52671000-52679800 Strong transcription Left Ventricle heart
47 chr3:52671000-52683000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr3:52671000-52697600 Strong transcription iPS-18 Cell Line embryonic stem cell
49 chr3:52671000-52697600 Strong transcription Skeletal Muscle Female skeletal muscle
50 chr3:52671000-52697800 Strong transcription Primary B cells from peripheral blood blood

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