Variant report
| Variant | rs72965177 |
|---|---|
| Chromosome Location | chr3:52635064-52635065 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:52587200-52719200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 2 | chr3:52591000-52688000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 3 | chr3:52592200-52719200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 4 | chr3:52613600-52635200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 5 | chr3:52613600-52635200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 6 | chr3:52613600-52635200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 7 | chr3:52621600-52635800 | Weak transcription | Hela-S3 | cervix |
| 8 | chr3:52623000-52635200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 9 | chr3:52623200-52635400 | Weak transcription | HMEC | breast |
| 10 | chr3:52627800-52640600 | Weak transcription | Fetal Heart | heart |
| 11 | chr3:52628200-52635200 | Weak transcription | Psoas Muscle | Psoas |
| 12 | chr3:52628600-52640200 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 13 | chr3:52629600-52635600 | Weak transcription | NH-A | brain |
| 14 | chr3:52630800-52638600 | Strong transcription | Osteobl | bone |
| 15 | chr3:52631200-52635200 | Weak transcription | Colonic Mucosa | Colon |
| 16 | chr3:52631200-52635200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 17 | chr3:52631200-52635200 | Weak transcription | NHLF | lung |
| 18 | chr3:52631600-52640600 | Weak transcription | Stomach Mucosa | stomach |
| 19 | chr3:52631800-52635400 | Weak transcription | Gastric | stomach |
| 20 | chr3:52631800-52635600 | Weak transcription | Brain Angular Gyrus | brain |
| 21 | chr3:52632000-52635200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 22 | chr3:52632000-52638600 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 23 | chr3:52632200-52636000 | ZNF genes & repeats | Fetal Intestine Large | intestine |
| 24 | chr3:52632200-52640400 | Strong transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 25 | chr3:52632400-52637200 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 26 | chr3:52633000-52635200 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 27 | chr3:52633000-52636800 | ZNF genes & repeats | Primary hematopoietic stem cells | blood |
| 28 | chr3:52633000-52637200 | ZNF genes & repeats | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 29 | chr3:52633600-52635800 | ZNF genes & repeats | Primary Natural Killer cells fromperipheralblood | blood |
| 30 | chr3:52633800-52637400 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 31 | chr3:52633800-52640400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 32 | chr3:52634000-52635400 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 33 | chr3:52634000-52635400 | ZNF genes & repeats | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 34 | chr3:52634000-52635600 | ZNF genes & repeats | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 35 | chr3:52634000-52635800 | ZNF genes & repeats | Adipose Nuclei | Adipose |
| 36 | chr3:52634000-52636000 | ZNF genes & repeats | Fetal Muscle Trunk | muscle |
| 37 | chr3:52634000-52636600 | ZNF genes & repeats | Primary neutrophils fromperipheralblood | blood |
| 38 | chr3:52634000-52636600 | ZNF genes & repeats | Primary B cells from peripheral blood | blood |
| 39 | chr3:52634000-52636800 | ZNF genes & repeats | Primary B cells from cord blood | blood |
| 40 | chr3:52634000-52636800 | ZNF genes & repeats | Fetal Brain Female | brain |
| 41 | chr3:52634000-52636800 | ZNF genes & repeats | Fetal Muscle Leg | muscle |
| 42 | chr3:52634000-52637000 | Strong transcription | Primary T killer naive cells fromperipheralblood | blood |
| 43 | chr3:52634000-52637400 | ZNF genes & repeats | Brain Germinal Matrix | brain |
| 44 | chr3:52634000-52637400 | ZNF genes & repeats | GM12878-XiMat | blood |
| 45 | chr3:52634200-52635200 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 46 | chr3:52634200-52635200 | ZNF genes & repeats | Brain Hippocampus Middle | brain |
| 47 | chr3:52634200-52635400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 48 | chr3:52634200-52635400 | ZNF genes & repeats | Rectal Mucosa Donor 29 | rectum |
| 49 | chr3:52634200-52635600 | ZNF genes & repeats | Primary T helper cells fromperipheralblood | blood |
| 50 | chr3:52634200-52635800 | ZNF genes & repeats | Primary T cells fromperipheralblood | blood |
