Variant report
| Variant | rs57869735 |
|---|---|
| Chromosome Location | chr3:52662850-52662851 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:52587200-52719200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 2 | chr3:52591000-52688000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 3 | chr3:52592200-52719200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 4 | chr3:52634800-52686000 | Strong transcription | Duodenum Mucosa | Duodenum |
| 5 | chr3:52636000-52703800 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 6 | chr3:52636000-52704000 | Strong transcription | Placenta | Placenta |
| 7 | chr3:52636200-52703200 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 8 | chr3:52636600-52669200 | Strong transcription | Primary B cells from peripheral blood | blood |
| 9 | chr3:52636600-52673600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 10 | chr3:52636600-52677400 | Weak transcription | Pancreas | Pancrea |
| 11 | chr3:52636800-52703600 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 12 | chr3:52637200-52715800 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 13 | chr3:52639600-52670000 | Strong transcription | Dnd41 | blood |
| 14 | chr3:52640600-52663200 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 15 | chr3:52640800-52684600 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 16 | chr3:52641000-52670800 | Weak transcription | Stomach Mucosa | stomach |
| 17 | chr3:52641600-52664800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 18 | chr3:52642400-52671000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 19 | chr3:52642400-52676400 | Weak transcription | Small Intestine | intestine |
| 20 | chr3:52642600-52711200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 21 | chr3:52643400-52691200 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 22 | chr3:52643600-52677200 | Weak transcription | Fetal Heart | heart |
| 23 | chr3:52643800-52682800 | Weak transcription | K562 | blood |
| 24 | chr3:52649400-52668800 | Strong transcription | Primary B cells from cord blood | blood |
| 25 | chr3:52649800-52669800 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 26 | chr3:52650000-52712200 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 27 | chr3:52651400-52666400 | Weak transcription | Fetal Intestine Small | intestine |
| 28 | chr3:52652800-52672400 | Weak transcription | Gastric | stomach |
| 29 | chr3:52652800-52673600 | Weak transcription | Aorta | Aorta |
| 30 | chr3:52653000-52671400 | Weak transcription | Spleen | Spleen |
| 31 | chr3:52654000-52667600 | Weak transcription | Colonic Mucosa | Colon |
| 32 | chr3:52654000-52669600 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 33 | chr3:52655200-52716400 | Strong transcription | Fetal Thymus | thymus |
| 34 | chr3:52655400-52669200 | Strong transcription | HSMM | muscle |
| 35 | chr3:52655600-52669400 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 36 | chr3:52655600-52680200 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 37 | chr3:52655600-52680200 | Strong transcription | Fetal Muscle Leg | muscle |
| 38 | chr3:52655800-52664800 | Strong transcription | Thymus | Thymus |
| 39 | chr3:52655800-52684600 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 40 | chr3:52655800-52697600 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 41 | chr3:52655800-52704000 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 42 | chr3:52656000-52683200 | Strong transcription | Adipose Nuclei | Adipose |
| 43 | chr3:52656200-52666400 | Weak transcription | Lung | lung |
| 44 | chr3:52656400-52664800 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 45 | chr3:52656400-52664800 | Strong transcription | HUVEC | blood vessel |
| 46 | chr3:52656400-52665000 | Strong transcription | Primary T cells from cord blood | blood |
| 47 | chr3:52656400-52669200 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 48 | chr3:52656400-52669400 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 49 | chr3:52656600-52664600 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 50 | chr3:52656600-52669200 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
