Variant report
| Variant | rs72947580 |
|---|---|
| Chromosome Location | chr3:52615483-52615484 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:52572400-52633000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr3:52574400-52623800 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 3 | chr3:52576800-52625600 | Strong transcription | Fetal Thymus | thymus |
| 4 | chr3:52578200-52625600 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 5 | chr3:52585800-52627400 | Weak transcription | Fetal Heart | heart |
| 6 | chr3:52587200-52719200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 7 | chr3:52591000-52688000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 8 | chr3:52592200-52719200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 9 | chr3:52595200-52631000 | Weak transcription | Stomach Mucosa | stomach |
| 10 | chr3:52596000-52622800 | Weak transcription | K562 | blood |
| 11 | chr3:52596000-52624200 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 12 | chr3:52598200-52625200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 13 | chr3:52602200-52617400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 14 | chr3:52602200-52623400 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 15 | chr3:52602600-52624400 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 16 | chr3:52603200-52617400 | Strong transcription | Fetal Muscle Trunk | muscle |
| 17 | chr3:52603400-52625400 | Strong transcription | Fetal Muscle Leg | muscle |
| 18 | chr3:52603600-52623800 | Strong transcription | Liver | Liver |
| 19 | chr3:52603800-52616000 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 20 | chr3:52603800-52625400 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 21 | chr3:52604000-52623400 | Strong transcription | Fetal Intestine Large | intestine |
| 22 | chr3:52606000-52615600 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 23 | chr3:52606000-52623400 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 24 | chr3:52606200-52625400 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 25 | chr3:52606400-52623600 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 26 | chr3:52606600-52623800 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 27 | chr3:52606600-52625400 | Strong transcription | Dnd41 | blood |
| 28 | chr3:52606800-52615800 | Strong transcription | Stomach Smooth Muscle | stomach |
| 29 | chr3:52606800-52623600 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 30 | chr3:52607200-52623600 | Strong transcription | Primary T cells from cord blood | blood |
| 31 | chr3:52607400-52623200 | Strong transcription | Left Ventricle | heart |
| 32 | chr3:52607600-52616000 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 33 | chr3:52607600-52618000 | Strong transcription | Osteobl | bone |
| 34 | chr3:52607600-52623400 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 35 | chr3:52607600-52623800 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 36 | chr3:52607600-52623800 | Strong transcription | Brain Germinal Matrix | brain |
| 37 | chr3:52607800-52616200 | Strong transcription | Primary B cells from peripheral blood | blood |
| 38 | chr3:52607800-52619000 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 39 | chr3:52607800-52623600 | Strong transcription | Adipose Nuclei | Adipose |
| 40 | chr3:52607800-52623800 | Strong transcription | Placenta | Placenta |
| 41 | chr3:52607800-52626600 | Strong transcription | Fetal Stomach | stomach |
| 42 | chr3:52608000-52621000 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 43 | chr3:52608200-52615600 | Strong transcription | NH-A | brain |
| 44 | chr3:52608200-52621200 | Strong transcription | Ovary | ovary |
| 45 | chr3:52608400-52623400 | Strong transcription | Fetal Lung | lung |
| 46 | chr3:52608800-52615800 | Strong transcription | Brain Anterior Caudate | brain |
| 47 | chr3:52608800-52623800 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 48 | chr3:52609000-52619600 | Weak transcription | Aorta | Aorta |
| 49 | chr3:52609000-52623400 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 50 | chr3:52610200-52621000 | Weak transcription | Hela-S3 | cervix |
