Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:121373782..121376223-chr7:121380019..121382572,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10953942	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10953945	0.83[ASN][1000 genomes]
rs1117623	0.83[ASN][1000 genomes]
rs1117624	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11762069	0.83[ASN][1000 genomes]
rs12534341	0.84[ASN][1000 genomes]
rs12536194	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12706370	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12706373	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12706374	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12706375	0.83[ASN][1000 genomes]
rs17438501	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2041650	0.99[ASN][1000 genomes]
rs2192295	0.84[ASN][1000 genomes]
rs2215792	0.85[ASN][1000 genomes]
rs34065436	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34346815	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35881110	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6945198	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9640802	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1032054	chr7:120926379-121432971	Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
2	nsv539103	chr7:120926379-121432971	Weak transcription Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
3	esv3398897	chr7:121379666-121381964	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:121376600-121381400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr7:121377000-121381200	Weak transcription	NHEK	skin
3	chr7:121379600-121382000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr7:121380000-121381200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr7:121380000-121390800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr7:121380200-121381400	Weak transcription	Cortex derived primary cultured neurospheres	brain

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