Variant report

Variant	rs56257650
Chromosome Location	chr12:117779856-117779857
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1004355	0.95[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12424669	0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1552228	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55833023	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs55990915	0.91[EUR][1000 genomes]
rs73208153	0.95[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9658264	0.95[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9658265	0.95[AFR][1000 genomes];0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9658266	0.95[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9658267	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9658269	0.95[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:117771600-117789000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr12:117773600-117780000	Weak transcription	NHEK	skin
3	chr12:117773600-117782600	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr12:117777200-117785400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr12:117777400-117785400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr12:117779800-117783400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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