Variant report

Variant	rs56266717
Chromosome Location	chr7:106666729-106666730
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs12113322	0.87[ASN][1000 genomes]
rs17153745	0.87[ASN][1000 genomes]
rs56132452	0.99[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60714435	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73413319	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73413321	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73413323	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73413330	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73413336	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73413342	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7798500	0.87[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:106664600-106667000	Enhancers	Fetal Brain Male	brain
2	chr7:106664800-106667000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr7:106664800-106670000	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr7:106665400-106666800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr7:106665800-106667000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr7:106665800-106667000	Enhancers	Adipose Nuclei	Adipose
7	chr7:106665800-106670200	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr7:106666000-106666800	Enhancers	Liver	Liver
9	chr7:106666000-106667000	Enhancers	Colon Smooth Muscle	Colon
10	chr7:106666000-106667600	Enhancers	Monocytes-CD14+_RO01746	blood
11	chr7:106666400-106667600	Weak transcription	Primary hematopoietic stem cells	blood
12	chr7:106666600-106666800	Enhancers	Fetal Stomach	stomach
13	chr7:106666600-106667000	Enhancers	Duodenum Smooth Muscle	Duodenum
14	chr7:106666600-106667600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
15	chr7:106666600-106669200	Enhancers	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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