Variant report

Variant	rs56268566
Chromosome Location	chr3:111779763-111779764
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs16859128	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs16859129	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs16859130	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs16859132	0.83[AFR][1000 genomes]
rs55913382	1.00[AMR][1000 genomes]
rs56200934	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs58414055	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs60361907	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs60746737	0.80[AFR][1000 genomes]
rs73853296	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73853298	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73853300	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73853302	0.85[AMR][1000 genomes]
rs73856303	0.83[AFR][1000 genomes]
rs73856305	0.82[AFR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:111768000-111779800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr3:111772600-111780200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr3:111775800-111779800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr3:111775800-111780000	Weak transcription	A549	lung
5	chr3:111776000-111779800	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr3:111776000-111779800	Weak transcription	NH-A	brain
7	chr3:111778800-111779800	Weak transcription	Placenta	Placenta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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