Variant report

Variant	rs56311637
Chromosome Location	chr3:157063657-157063658
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs12494423	0.91[ASN][1000 genomes]
rs12636252	0.89[ASN][1000 genomes]
rs1392798	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1500921	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1500923	0.90[ASN][1000 genomes]
rs1581413	0.91[ASN][1000 genomes]
rs34263112	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62278578	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62278580	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:157041000-157065600	Weak transcription	Pancreas	Pancrea
2	chr3:157054800-157065200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr3:157055800-157065600	Weak transcription	Osteobl	bone
4	chr3:157056200-157072600	Weak transcription	HUVEC	blood vessel
5	chr3:157057000-157072800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr3:157057400-157065200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr3:157058200-157065200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr3:157058800-157064000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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