Variant report

Variant	rs56317995
Chromosome Location	chr7:138431017-138431018
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs13246226	1.00[EUR][1000 genomes]
rs13246294	1.00[EUR][1000 genomes]
rs28691054	1.00[EUR][1000 genomes]
rs3807149	1.00[EUR][1000 genomes]
rs3807152	1.00[EUR][1000 genomes]
rs56983691	1.00[EUR][1000 genomes]
rs6972218	1.00[EUR][1000 genomes]
rs73730479	1.00[EUR][1000 genomes]
rs73730493	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030956	chr7:138163169-138579519	Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:138400600-138439000	Weak transcription	Right Atrium	heart
2	chr7:138419800-138437400	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr7:138423200-138438200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr7:138423600-138436800	Weak transcription	Placenta	Placenta
5	chr7:138424000-138431400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr7:138424000-138435200	Weak transcription	Dnd41	blood
7	chr7:138424200-138437200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr7:138426200-138435800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr7:138426400-138436600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr7:138429800-138431600	Enhancers	Thymus	Thymus
11	chr7:138429800-138436000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
12	chr7:138429800-138440600	Enhancers	Fetal Thymus	thymus
13	chr7:138430200-138433400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
14	chr7:138430600-138435000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
15	chr7:138430600-138436000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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