Variant report

Variant	rs73730493
Chromosome Location	chr7:138426089-138426090
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:138415554..138418128-chr7:138424771..138426585,2	K562	blood:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs13246226	1.00[EUR][1000 genomes]
rs13246294	1.00[EUR][1000 genomes]
rs28691054	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3807149	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3807152	1.00[EUR][1000 genomes]
rs56317995	1.00[EUR][1000 genomes]
rs56983691	1.00[EUR][1000 genomes]
rs6972218	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73730479	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030956	chr7:138163169-138579519	Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:138400600-138439000	Weak transcription	Right Atrium	heart
2	chr7:138419800-138437400	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr7:138423200-138438200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr7:138423600-138426400	Weak transcription	Fetal Stomach	stomach
5	chr7:138423600-138436800	Weak transcription	Placenta	Placenta
6	chr7:138424000-138431400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr7:138424000-138435200	Weak transcription	Dnd41	blood
8	chr7:138424200-138429800	Weak transcription	Fetal Thymus	thymus
9	chr7:138424200-138437200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr7:138424400-138429800	Weak transcription	Thymus	Thymus
11	chr7:138425800-138426400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr7:138426000-138426200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr7:138426000-138426200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr7:138426000-138426200	Enhancers	Gastric	stomach
15	chr7:138426000-138426200	Enhancers	HMEC	breast
16	chr7:138426000-138426400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr7:138426000-138426400	Enhancers	Hela-S3	cervix
18	chr7:138426000-138426400	Enhancers	HUVEC	blood vessel
19	chr7:138426000-138426400	Enhancers	Osteobl	bone
20	chr7:138426000-138426600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr7:138426000-138426600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr7:138426000-138426800	Enhancers	HSMMtube	muscle
23	chr7:138426000-138426800	Enhancers	NH-A	brain

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