The 2.0 version of rSNPBase

Variant report

Variant rs56323443
Chromosome Location chr15:56519010-56519011
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56485600-56521200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr15:56508000-56534400 Weak transcription Fetal Heart heart
3 chr15:56508200-56524000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr15:56508400-56523000 Weak transcription H9 Cell Line embryonic stem cell
5 chr15:56509000-56533600 Weak transcription Osteobl bone
6 chr15:56509800-56522400 Weak transcription Fetal Brain Male brain
7 chr15:56510200-56523200 Weak transcription NH-A brain
8 chr15:56510600-56528600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr15:56512200-56519600 Weak transcription HSMM muscle
10 chr15:56513800-56523800 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr15:56513800-56530200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
12 chr15:56514000-56535000 Weak transcription Pancreas Pancrea
13 chr15:56514600-56532400 Weak transcription HSMMtube muscle
14 chr15:56514800-56520400 Weak transcription Fetal Kidney kidney
15 chr15:56514800-56534800 Weak transcription Placenta Amnion Placenta Amnion
16 chr15:56515400-56522800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr15:56515400-56523600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr15:56515600-56519800 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr15:56515600-56520400 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr15:56515600-56522400 Weak transcription HMEC breast
21 chr15:56515600-56522800 Weak transcription Fetal Thymus thymus
22 chr15:56515600-56523000 Weak transcription Thymus Thymus
23 chr15:56515600-56524000 Weak transcription Aorta Aorta
24 chr15:56515600-56524000 Weak transcription Ovary ovary
25 chr15:56515800-56520000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr15:56515800-56520200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr15:56515800-56520200 Weak transcription Liver Liver
28 chr15:56515800-56521000 Weak transcription Fetal Intestine Small intestine
29 chr15:56515800-56521200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr15:56515800-56522000 Weak transcription NHEK skin
31 chr15:56515800-56522200 Weak transcription Hela-S3 cervix
32 chr15:56515800-56522400 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr15:56515800-56523200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr15:56515800-56523800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr15:56515800-56523800 Weak transcription Left Ventricle heart
36 chr15:56515800-56523800 Weak transcription Small Intestine intestine
37 chr15:56515800-56523800 Weak transcription HepG2 liver
38 chr15:56515800-56524000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr15:56515800-56524200 Weak transcription HUVEC blood vessel
40 chr15:56515800-56529200 Weak transcription Colon Smooth Muscle Colon
41 chr15:56516000-56519400 Weak transcription H1 Cell Line embryonic stem cell
42 chr15:56516200-56520000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr15:56516200-56520200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr15:56516200-56525600 Weak transcription NHDF-Ad bronchial
45 chr15:56516400-56520200 Weak transcription A549 lung
46 chr15:56516600-56519400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr15:56516800-56519800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr15:56517000-56520800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr15:56517200-56519800 Enhancers iPS-18 Cell Line embryonic stem cell
50 chr15:56517200-56524200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015