The 2.0 version of rSNPBase

Variant report

Variant rs72738660
Chromosome Location chr15:56498700-56498701
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56453600-56515000 Weak transcription NHLF lung
2 chr15:56457400-56500400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr15:56459200-56511000 Weak transcription Esophagus oesophagus
4 chr15:56466000-56500000 Weak transcription Thymus Thymus
5 chr15:56466000-56514200 Weak transcription Duodenum Mucosa Duodenum
6 chr15:56467000-56500400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr15:56467000-56511600 Weak transcription Fetal Intestine Small intestine
8 chr15:56470200-56498800 Weak transcription Dnd41 blood
9 chr15:56470800-56503800 Weak transcription Fetal Lung lung
10 chr15:56477000-56500400 Weak transcription Liver Liver
11 chr15:56480000-56500000 Weak transcription Primary T cells fromperipheralblood blood
12 chr15:56480200-56515400 Weak transcription Hela-S3 cervix
13 chr15:56482600-56500200 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr15:56484800-56500000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr15:56485000-56502800 Weak transcription Gastric stomach
16 chr15:56485600-56500000 Weak transcription Aorta Aorta
17 chr15:56485600-56521200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr15:56489200-56503600 Weak transcription Primary hematopoietic stem cells blood
19 chr15:56493000-56500000 Weak transcription Ovary ovary
20 chr15:56493200-56515400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr15:56495000-56500000 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr15:56495200-56500000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr15:56495200-56500000 Weak transcription Psoas Muscle Psoas
24 chr15:56495200-56501600 Enhancers Primary B cells from peripheral blood blood
25 chr15:56495200-56504400 Weak transcription Fetal Intestine Large intestine
26 chr15:56495400-56499000 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr15:56495800-56499800 Enhancers Primary B cells from cord blood blood
28 chr15:56495800-56500400 Weak transcription H1 Cell Line embryonic stem cell
29 chr15:56496400-56501200 Enhancers Primary T helper cells PMA-I stimulated --
30 chr15:56496600-56500400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr15:56496600-56515200 Weak transcription Left Ventricle heart
32 chr15:56496800-56500400 Weak transcription K562 blood
33 chr15:56497000-56502000 Enhancers Primary T killer memory cells from peripheral blood blood
34 chr15:56497000-56502600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
35 chr15:56497000-56502600 Enhancers Primary T helper cells fromperipheralblood blood
36 chr15:56497400-56499800 Enhancers Primary T cells from cord blood blood
37 chr15:56497400-56499800 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr15:56497400-56505000 Weak transcription HSMMtube muscle
39 chr15:56497600-56500600 Weak transcription Brain Substantia Nigra brain
40 chr15:56497600-56501600 Enhancers Primary T helper naive cells fromperipheralblood blood
41 chr15:56497800-56500400 Weak transcription Brain Cingulate Gyrus brain
42 chr15:56497800-56500400 Weak transcription HSMM muscle
43 chr15:56497800-56502400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr15:56498000-56499200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr15:56498000-56499400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr15:56498000-56499400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr15:56498000-56500400 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr15:56498000-56500400 Weak transcription Adipose Nuclei Adipose
49 chr15:56498000-56503800 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr15:56498200-56499800 Weak transcription NH-A brain

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Last update: Aug 31, 2015