Variant report

Variant rs11071250
Chromosome Location chr15:56419946-56419947
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56388800-56433000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr15:56388800-56437200 Weak transcription Pancreas Pancrea
3 chr15:56388800-56441600 Weak transcription Lung lung
4 chr15:56411400-56424000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr15:56411600-56436800 Weak transcription Stomach Smooth Muscle stomach
6 chr15:56412200-56420400 Weak transcription Colonic Mucosa Colon
7 chr15:56412400-56423200 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
8 chr15:56412600-56422000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr15:56413200-56423800 ZNF genes & repeats Primary hematopoietic stem cells blood
10 chr15:56413400-56441600 Weak transcription Spleen Spleen
11 chr15:56413600-56421800 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr15:56416000-56421400 Weak transcription Placenta Placenta
13 chr15:56416000-56433200 Weak transcription Hela-S3 cervix
14 chr15:56416200-56423400 Weak transcription Left Ventricle heart
15 chr15:56416200-56433000 Weak transcription Thymus Thymus
16 chr15:56416200-56434800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr15:56416200-56437800 Weak transcription H9 Cell Line embryonic stem cell
18 chr15:56416200-56441600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr15:56416400-56434600 Weak transcription NH-A brain
20 chr15:56417000-56420400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr15:56417200-56422400 ZNF genes & repeats A549 lung
22 chr15:56417200-56423800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
23 chr15:56417600-56421800 Weak transcription Ovary ovary
24 chr15:56418000-56420600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr15:56418000-56422400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
26 chr15:56418000-56424000 ZNF genes & repeats GM12878-XiMat blood
27 chr15:56418200-56421000 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
28 chr15:56418200-56421000 ZNF genes & repeats Primary B cells from peripheral blood blood
29 chr15:56418400-56420600 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
30 chr15:56418400-56423400 ZNF genes & repeats Dnd41 blood
31 chr15:56418800-56431600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr15:56419200-56424400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr15:56419200-56433000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr15:56419200-56433000 Weak transcription Fetal Thymus thymus
35 chr15:56419200-56433000 Weak transcription HSMM muscle
36 chr15:56419200-56434200 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr15:56419200-56438400 Weak transcription Psoas Muscle Psoas
38 chr15:56419400-56420200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr15:56419400-56420200 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr15:56419400-56420200 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr15:56419400-56420200 Weak transcription Fetal Lung lung
42 chr15:56419400-56420400 Weak transcription Primary B cells from cord blood blood
43 chr15:56419400-56420800 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr15:56419400-56421200 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr15:56419400-56421200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr15:56419400-56421400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
47 chr15:56419400-56421800 Weak transcription Primary T cells fromperipheralblood blood
48 chr15:56419400-56422000 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr15:56419400-56432800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr15:56419400-56432800 Weak transcription Skeletal Muscle Male skeletal muscle

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