The 2.0 version of rSNPBase

Variant report

Variant rs8027386
Chromosome Location chr15:56507774-56507775
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56453600-56515000 Weak transcription NHLF lung
2 chr15:56459200-56511000 Weak transcription Esophagus oesophagus
3 chr15:56466000-56514200 Weak transcription Duodenum Mucosa Duodenum
4 chr15:56467000-56511600 Weak transcription Fetal Intestine Small intestine
5 chr15:56480200-56515400 Weak transcription Hela-S3 cervix
6 chr15:56485600-56521200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr15:56493200-56515400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr15:56496600-56515200 Weak transcription Left Ventricle heart
9 chr15:56498200-56508000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr15:56498400-56514400 Weak transcription NHEK skin
11 chr15:56498400-56515200 Weak transcription HUVEC blood vessel
12 chr15:56500600-56513000 Weak transcription HMEC breast
13 chr15:56500600-56515200 Weak transcription Ovary ovary
14 chr15:56500800-56508000 Weak transcription Right Ventricle heart
15 chr15:56500800-56514400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr15:56500800-56515200 Weak transcription Thymus Thymus
17 chr15:56501400-56507800 Weak transcription Muscle Satellite Cultured Cells --
18 chr15:56501400-56508000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr15:56501600-56508400 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr15:56501600-56511800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr15:56502000-56507800 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr15:56502200-56508400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr15:56502400-56514600 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr15:56502800-56508000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr15:56504000-56508000 Strong transcription A549 lung
26 chr15:56504000-56509000 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr15:56504200-56515200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr15:56504400-56508000 Weak transcription Brain Hippocampus Middle brain
29 chr15:56504400-56508400 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr15:56504600-56511800 Weak transcription Fetal Kidney kidney
31 chr15:56504800-56507800 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr15:56504800-56508600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr15:56504800-56510800 Weak transcription HSMM muscle
34 chr15:56504800-56511600 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr15:56504800-56511800 Weak transcription K562 blood
36 chr15:56504800-56515200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr15:56505000-56515200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr15:56505600-56513600 Weak transcription Brain Anterior Caudate brain
39 chr15:56505600-56514400 Weak transcription HepG2 liver
40 chr15:56505800-56508000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr15:56505800-56511600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr15:56505800-56514800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr15:56506000-56514200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr15:56506200-56510600 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr15:56506400-56507800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr15:56506400-56508000 Weak transcription Primary B cells from cord blood blood
47 chr15:56506400-56510600 Weak transcription Primary hematopoietic stem cells blood
48 chr15:56506400-56511600 Weak transcription Fetal Lung lung
49 chr15:56506400-56514400 Weak transcription Dnd41 blood
50 chr15:56507200-56508400 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015