Variant report

Variant	rs56372770
Chromosome Location	chr10:94492064-94492065
allele	A/C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs56061746	0.83[AFR][1000 genomes]
rs58214680	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74149117	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74149118	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74149119	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74149121	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74149123	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74149124	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74149128	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74149129	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446249	chr10:94374508-94549394	Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94488000-94492600	Weak transcription	K562	blood
2	chr10:94491200-94493800	Weak transcription	Primary B cells from cord blood	blood
3	chr10:94491400-94492600	Weak transcription	Primary B cells from peripheral blood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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