Variant report

Variant rs564911
Chromosome Location chr6:11620552-11620553
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:11610200-11631400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr6:11611200-11622600 Weak transcription Fetal Muscle Leg muscle
3 chr6:11615600-11621400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr6:11616600-11622200 Weak transcription Psoas Muscle Psoas
5 chr6:11616800-11621200 Weak transcription Fetal Stomach stomach
6 chr6:11616800-11622200 Weak transcription Stomach Smooth Muscle stomach
7 chr6:11616800-11622400 Weak transcription Rectal Smooth Muscle rectum
8 chr6:11616800-11622600 Weak transcription Fetal Muscle Trunk muscle
9 chr6:11616800-11622800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr6:11616800-11623000 Weak transcription Lung lung
11 chr6:11618200-11621800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
12 chr6:11618600-11622600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr6:11618800-11625200 Weak transcription HSMM muscle
14 chr6:11618800-11627200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr6:11619200-11621200 Weak transcription NHLF lung
16 chr6:11619600-11621000 Enhancers Pancreatic Islets Pancreatic Islet
17 chr6:11619600-11622000 Strong transcription HSMMtube muscle
18 chr6:11620200-11622400 Weak transcription Colon Smooth Muscle Colon

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