Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10097618	1.00[EUR][1000 genomes]
rs59615645	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60185055	1.00[AMR][1000 genomes]
rs61083487	1.00[AMR][1000 genomes]
rs61119787	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61599569	1.00[AMR][1000 genomes]
rs73244044	1.00[AMR][1000 genomes]
rs73244048	1.00[AMR][1000 genomes]
rs73244058	1.00[AMR][1000 genomes]
rs73244518	1.00[AMR][1000 genomes]
rs73244547	1.00[AMR][1000 genomes]
rs73244563	1.00[AMR][1000 genomes]
rs73244569	1.00[AMR][1000 genomes]
rs73244588	1.00[AMR][1000 genomes]
rs73244595	1.00[AMR][1000 genomes]
rs73244597	1.00[AMR][1000 genomes]
rs73246219	1.00[AMR][1000 genomes]
rs73246221	1.00[AMR][1000 genomes]
rs73246230	1.00[AMR][1000 genomes]
rs73246241	1.00[AMR][1000 genomes]
rs73246243	1.00[AMR][1000 genomes]
rs73246246	1.00[AMR][1000 genomes]
rs73246249	1.00[AMR][1000 genomes]
rs73246251	1.00[AMR][1000 genomes]
rs73246253	1.00[AMR][1000 genomes]
rs7830204	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948343	chr8:64804219-65328394	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS ZNF genes & repeats Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
2	nsv890969	chr8:64807144-65047353	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64969800-64973200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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