The 2.0 version of rSNPBase

Variant report

Variant rs56735283
Chromosome Location chr9:72780699-72780700
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:72726800-72785200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr9:72741600-72789400 Weak transcription Spleen Spleen
3 chr9:72759600-72800000 Weak transcription Right Ventricle heart
4 chr9:72759800-72792200 Weak transcription HMEC breast
5 chr9:72760000-72785200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr9:72766200-72785200 Weak transcription Left Ventricle heart
7 chr9:72770000-72783600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr9:72773200-72783200 Weak transcription Pancreas Pancrea
9 chr9:72775200-72783600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr9:72775200-72800000 Weak transcription Esophagus oesophagus
11 chr9:72775800-72785200 Weak transcription Adipose Nuclei Adipose
12 chr9:72776800-72791800 Weak transcription Fetal Lung lung
13 chr9:72777000-72792400 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr9:72777200-72784800 Weak transcription Rectal Smooth Muscle rectum
15 chr9:72777400-72789400 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr9:72777600-72783600 Weak transcription Colon Smooth Muscle Colon
17 chr9:72777800-72785200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr9:72777800-72785400 Weak transcription Ovary ovary
19 chr9:72777800-72800000 Weak transcription Fetal Stomach stomach
20 chr9:72778400-72785400 Weak transcription Aorta Aorta
21 chr9:72779000-72780800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr9:72779200-72789600 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr9:72779200-72792400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr9:72779600-72780800 Strong transcription Stomach Smooth Muscle stomach
25 chr9:72779800-72780800 Genic enhancers HSMMtube muscle
26 chr9:72780000-72780800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr9:72780200-72780800 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr9:72780400-72781600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr9:72780400-72796000 Weak transcription Fetal Muscle Leg muscle
30 chr9:72780400-72800000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr9:72780600-72782800 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr9:72780600-72783600 Weak transcription HSMM muscle
33 chr9:72780600-72783800 Weak transcription NH-A brain
34 chr9:72780600-72785200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr9:72780600-72785200 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr9:72780600-72785600 Weak transcription HUES64 Cell Line embryonic stem cell
37 chr9:72780600-72787600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr9:72780600-72791400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr9:72780600-72801400 Weak transcription Muscle Satellite Cultured Cells --
40 chr9:72780600-72803600 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015