Variant report

Variant	rs567807995
Chromosome Location	chr20:25732710-25732711
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv912834	chr20:25615272-25756336	Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv1056288	chr20:25662941-25744711	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
3	nsv1057618	chr20:25665455-25744711	Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
4	esv2758517	chr20:25701992-26319569	ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
5	esv2758790	chr20:25701992-26319569	Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
6	nsv1062442	chr20:25714010-25754838	Flanking Active TSS Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
7	nsv470545	chr20:25715507-26309255	Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	48 gene(s)	inside rSNPs	diseases
8	esv18917	chr20:25731048-25780918	Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
9	nsv820681	chr20:25731048-25780918	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
10	nsv979422	chr20:25732656-25867609	Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:25731200-25732800	Active TSS	iPS-15b Cell Line	embryonic stem cell
2	chr20:25731200-25732800	Enhancers	Spleen	Spleen
3	chr20:25732000-25732800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr20:25732200-25732800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
5	chr20:25732200-25732800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
6	chr20:25732200-25732800	Enhancers	Esophagus	oesophagus
7	chr20:25732200-25732800	Enhancers	Lung	lung
8	chr20:25732200-25736400	Weak transcription	Brain Angular Gyrus	brain
9	chr20:25732200-25737800	Weak transcription	Sigmoid Colon	Sigmoid Colon
10	chr20:25732400-25732800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr20:25732400-25732800	Enhancers	Primary T cells fromperipheralblood	blood
12	chr20:25732400-25732800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
13	chr20:25732400-25732800	Enhancers	Primary T helper cells PMA-I stimulated	--
14	chr20:25732400-25732800	Enhancers	Primary T helper cells fromperipheralblood	blood
15	chr20:25732400-25732800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr20:25732400-25732800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr20:25732400-25732800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr20:25732400-25732800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr20:25732400-25732800	Enhancers	Fetal Brain Female	brain
20	chr20:25732400-25732800	Enhancers	Pancreas	Pancrea
21	chr20:25732400-25732800	Enhancers	Right Ventricle	heart
22	chr20:25732400-25733000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr20:25732400-25737800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
24	chr20:25732600-25732800	Enhancers	Breast Myoepithelial Primary Cells	Breast
25	chr20:25732600-25732800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
26	chr20:25732600-25732800	Enhancers	Adipose Nuclei	Adipose
27	chr20:25732600-25732800	Active TSS	Fetal Lung	lung
28	chr20:25732600-25732800	Flanking Active TSS	HepG2	liver
29	chr20:25732600-25733000	Enhancers	Fetal Brain Male	brain
30	chr20:25732600-25737800	Weak transcription	Thymus	Thymus

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