The 2.0 version of rSNPBase

Variant report

Variant rs56794875
Chromosome Location chr9:100070558-100070559
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100057000-100075000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr9:100057400-100075400 Weak transcription Dnd41 blood
3 chr9:100060200-100071600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr9:100068800-100071600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr9:100068800-100074200 Weak transcription Thymus Thymus
6 chr9:100069200-100070600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr9:100069200-100071800 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr9:100069400-100071600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr9:100069400-100092800 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr9:100069600-100071800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr9:100069600-100094400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr9:100069800-100070600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
13 chr9:100069800-100075400 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr9:100069800-100076600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr9:100069800-100077400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr9:100069800-100086400 Weak transcription H9 Cell Line embryonic stem cell
17 chr9:100070000-100071000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
18 chr9:100070000-100071600 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr9:100070000-100071800 Weak transcription Aorta Aorta
20 chr9:100070000-100072000 Weak transcription Primary T cells fromperipheralblood blood
21 chr9:100070000-100072200 Weak transcription Spleen Spleen
22 chr9:100070000-100074400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr9:100070000-100075400 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr9:100070000-100076000 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr9:100070000-100091400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr9:100070000-100093800 Weak transcription Psoas Muscle Psoas
27 chr9:100070000-100098000 Weak transcription Small Intestine intestine
28 chr9:100070000-100100200 Weak transcription Fetal Heart heart
29 chr9:100070000-100131400 Weak transcription Fetal Kidney kidney
30 chr9:100070200-100070600 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr9:100070200-100070600 Enhancers Liver Liver
32 chr9:100070200-100071600 Weak transcription Lung lung
33 chr9:100070200-100071600 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr9:100070200-100071800 Weak transcription Left Ventricle heart
35 chr9:100070200-100072000 Enhancers Muscle Satellite Cultured Cells --
36 chr9:100070200-100073000 Weak transcription Brain Hippocampus Middle brain
37 chr9:100070200-100073800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr9:100070200-100076800 Weak transcription Rectal Smooth Muscle rectum
39 chr9:100070200-100092600 Weak transcription H1 Cell Line embryonic stem cell
40 chr9:100070200-100095000 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr9:100070400-100070600 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr9:100070400-100070600 Enhancers Adipose Nuclei Adipose
43 chr9:100070400-100070600 Enhancers Fetal Muscle Leg muscle
44 chr9:100070400-100070600 Enhancers Osteobl bone
45 chr9:100070400-100071000 Enhancers iPS-15b Cell Line embryonic stem cell
46 chr9:100070400-100071000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr9:100070400-100071000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr9:100070400-100071200 Weak transcription Stomach Smooth Muscle stomach
49 chr9:100070400-100071400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr9:100070400-100071400 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015