The 2.0 version of rSNPBase

Variant report

Variant rs73559812
Chromosome Location chr9:100057921-100057922
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100035000-100059600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr9:100041400-100059600 Weak transcription Fetal Brain Male brain
3 chr9:100046600-100069000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr9:100047800-100058000 Strong transcription Primary T cells from cord blood blood
5 chr9:100049600-100058600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr9:100050400-100058000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr9:100050600-100058200 Strong transcription Fetal Intestine Small intestine
8 chr9:100051200-100061000 Weak transcription Colonic Mucosa Colon
9 chr9:100051400-100059400 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr9:100052200-100059000 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr9:100052800-100058000 Strong transcription Fetal Brain Female brain
12 chr9:100052800-100058400 Strong transcription Duodenum Smooth Muscle Duodenum
13 chr9:100053000-100058000 Strong transcription Aorta Aorta
14 chr9:100053600-100059200 Weak transcription Monocytes-CD14+_RO01746 blood
15 chr9:100053600-100061400 Weak transcription Placenta Amnion Placenta Amnion
16 chr9:100053600-100062600 Weak transcription Hela-S3 cervix
17 chr9:100053800-100059600 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr9:100053800-100059800 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr9:100053800-100060400 Weak transcription H9 Cell Line embryonic stem cell
20 chr9:100054200-100058200 Genic enhancers Fetal Muscle Trunk muscle
21 chr9:100054200-100059400 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr9:100054200-100060600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr9:100054400-100059400 Weak transcription Primary B cells from cord blood blood
24 chr9:100054400-100059800 Weak transcription Colon Smooth Muscle Colon
25 chr9:100054800-100058200 Enhancers Left Ventricle heart
26 chr9:100054800-100059200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr9:100054800-100060000 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr9:100054800-100069000 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr9:100054800-100069400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr9:100055000-100069400 Weak transcription Rectal Smooth Muscle rectum
31 chr9:100055400-100058400 Enhancers Right Ventricle heart
32 chr9:100055800-100059200 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr9:100056000-100058000 Strong transcription Thymus Thymus
34 chr9:100056000-100058200 Strong transcription Ovary ovary
35 chr9:100056000-100059400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr9:100056000-100059600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr9:100056200-100058200 Strong transcription Brain Germinal Matrix brain
38 chr9:100056200-100058800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr9:100056200-100059400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr9:100056200-100069200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr9:100056400-100058000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr9:100056400-100058000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
43 chr9:100056400-100058000 Strong transcription Brain Angular Gyrus brain
44 chr9:100056400-100058000 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr9:100056400-100058200 Strong transcription Brain Inferior Temporal Lobe brain
46 chr9:100056400-100058200 Strong transcription Fetal Intestine Large intestine
47 chr9:100056400-100058200 Strong transcription Pancreas Pancrea
48 chr9:100056400-100058400 Weak transcription Primary T cells fromperipheralblood blood
49 chr9:100056400-100060400 Weak transcription Fetal Heart heart
50 chr9:100056400-100062400 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015