The 2.0 version of rSNPBase

Variant report

Variant rs56852527
Chromosome Location chr11:46048384-46048385
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46001400-46070400 Weak transcription Primary hematopoietic stem cells blood
2 chr11:46002000-46056200 Weak transcription Primary T helper cells fromperipheralblood blood
3 chr11:46012800-46062800 Weak transcription GM12878-XiMat blood
4 chr11:46022000-46074600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr11:46025600-46056200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr11:46026200-46055600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr11:46031400-46048400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr11:46032400-46048400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr11:46032600-46052800 Weak transcription Fetal Lung lung
10 chr11:46034200-46049000 Weak transcription Fetal Kidney kidney
11 chr11:46034400-46056000 Weak transcription Primary B cells from cord blood blood
12 chr11:46034800-46061800 Weak transcription Primary T cells fromperipheralblood blood
13 chr11:46035200-46048400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr11:46035200-46061800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr11:46035200-46062000 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr11:46035400-46048400 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr11:46035400-46060800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr11:46038800-46053400 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr11:46039200-46077200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr11:46039400-46096800 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr11:46040200-46048600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr11:46041000-46061400 Weak transcription Adipose Nuclei Adipose
23 chr11:46041000-46066200 Weak transcription Liver Liver
24 chr11:46041000-46071000 Weak transcription Placenta Placenta
25 chr11:46041200-46051200 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr11:46041200-46070800 Weak transcription Thymus Thymus
27 chr11:46041400-46086600 Weak transcription Fetal Intestine Large intestine
28 chr11:46042000-46061600 Weak transcription Brain Inferior Temporal Lobe brain
29 chr11:46042000-46061600 Weak transcription Ovary ovary
30 chr11:46042000-46065000 Weak transcription Pancreas Pancrea
31 chr11:46042000-46071000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr11:46042000-46071000 Weak transcription Brain Angular Gyrus brain
33 chr11:46042200-46048400 Weak transcription Brain Cingulate Gyrus brain
34 chr11:46042400-46052800 Weak transcription Brain Hippocampus Middle brain
35 chr11:46043200-46048400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr11:46043200-46048400 Weak transcription Osteobl bone
37 chr11:46043200-46071000 Weak transcription Lung lung
38 chr11:46043200-46086800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr11:46043600-46061800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr11:46043800-46062400 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr11:46044200-46048400 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr11:46044400-46048400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr11:46044400-46052400 Weak transcription Fetal Stomach stomach
44 chr11:46044400-46071000 Weak transcription Fetal Muscle Trunk muscle
45 chr11:46044400-46071200 Weak transcription Fetal Intestine Small intestine
46 chr11:46045000-46070600 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr11:46045000-46087000 Weak transcription Hela-S3 cervix
48 chr11:46045200-46055800 Weak transcription Primary monocytes fromperipheralblood blood
49 chr11:46045600-46058000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr11:46045800-46055600 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015