Variant report

Variant rs56872371
Chromosome Location chr17:46663774-46663775
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:46658800-46665800 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
2 chr17:46661600-46667000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr17:46661800-46663800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr17:46661800-46664000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr17:46662000-46663800 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
6 chr17:46662000-46664600 Active TSS NHDF-Ad bronchial
7 chr17:46662000-46665200 Active TSS Colon Smooth Muscle Colon
8 chr17:46662200-46664000 Active TSS Fetal Kidney kidney
9 chr17:46662200-46664000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
10 chr17:46662200-46664000 Active TSS Right Atrium heart
11 chr17:46662200-46664200 Active TSS Rectal Smooth Muscle rectum
12 chr17:46662400-46663800 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
13 chr17:46662400-46663800 Flanking Bivalent TSS/Enh Fetal Intestine Small intestine
14 chr17:46662400-46663800 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
15 chr17:46662400-46663800 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
16 chr17:46662400-46663800 Active TSS Psoas Muscle Psoas
17 chr17:46662400-46664000 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
18 chr17:46662400-46664000 Flanking Bivalent TSS/Enh Primary T regulatory cells fromperipheralblood blood
19 chr17:46662400-46664000 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr17:46662400-46664000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
21 chr17:46662400-46664000 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
22 chr17:46662400-46664000 Flanking Active TSS Stomach Smooth Muscle stomach
23 chr17:46662400-46664200 Flanking Bivalent TSS/Enh Primary T helper cells PMA-I stimulated --
24 chr17:46662400-46664200 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
25 chr17:46662400-46664200 Flanking Bivalent TSS/Enh Fetal Intestine Large intestine
26 chr17:46662400-46664200 Flanking Active TSS HUVEC blood vessel
27 chr17:46662400-46665000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
28 chr17:46662400-46665000 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
29 chr17:46662400-46665600 Flanking Active TSS Adipose Nuclei Adipose
30 chr17:46662400-46668000 Flanking Active TSS Primary hematopoietic stem cells blood
31 chr17:46662600-46663800 Flanking Bivalent TSS/Enh Ganglion Eminence derived primary cultured neurospheres brain
32 chr17:46662600-46663800 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr17:46662600-46664000 Flanking Bivalent TSS/Enh Primary T helper cells fromperipheralblood blood
34 chr17:46662600-46664000 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
35 chr17:46662800-46663800 Flanking Bivalent TSS/Enh Primary monocytes fromperipheralblood blood
36 chr17:46662800-46663800 Flanking Bivalent TSS/Enh Primary B cells from cord blood blood
37 chr17:46662800-46664000 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr17:46662800-46664000 Active TSS Right Ventricle heart
39 chr17:46663000-46663800 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
40 chr17:46663000-46663800 Flanking Bivalent TSS/Enh Primary T killer naive cells fromperipheralblood blood
41 chr17:46663000-46663800 Flanking Bivalent TSS/Enh Liver Liver
42 chr17:46663000-46663800 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
43 chr17:46663000-46664000 Flanking Bivalent TSS/Enh Primary T cells from cord blood blood
44 chr17:46663000-46664000 Flanking Bivalent TSS/Enh Primary mononuclear cells fromperipheralblood Blood
45 chr17:46663200-46663800 Flanking Bivalent TSS/Enh ES-I3 Cell Line embryonic stem cell
46 chr17:46663200-46663800 Flanking Bivalent TSS/Enh hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr17:46663200-46663800 Flanking Bivalent TSS/Enh Breast Myoepithelial Primary Cells Breast
48 chr17:46663200-46663800 Flanking Bivalent TSS/Enh Primary T helper memory cells from peripheral blood 2 blood
49 chr17:46663200-46663800 Flanking Bivalent TSS/Enh Primary T helper memory cells from peripheral blood 1 blood
50 chr17:46663200-46663800 Flanking Bivalent TSS/Enh Primary Natural Killer cells fromperipheralblood blood

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