Variant report

Variant	rs56984761
Chromosome Location	chr10:23697742-23697743
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11013427	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11013432	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11013433	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57142582	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7077959	1.00[EUR][1000 genomes]
rs7078402	1.00[EUR][1000 genomes]
rs7085674	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7101025	1.00[EUR][1000 genomes]
rs73602541	0.80[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73602543	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73602544	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73602547	1.00[EUR][1000 genomes]
rs73602571	1.00[EUR][1000 genomes]
rs7921695	1.00[EUR][1000 genomes]
rs9651373	1.00[EUR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23689400-23701000	Weak transcription	Osteobl	bone
2	chr10:23693800-23706400	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr10:23693800-23706400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr10:23694000-23701000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr10:23694600-23701400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr10:23694600-23707800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr10:23695000-23698000	Weak transcription	Placenta	Placenta
8	chr10:23696000-23700600	Weak transcription	Primary monocytes fromperipheralblood	blood
9	chr10:23696600-23698000	Enhancers	Fetal Lung	lung
10	chr10:23697000-23697800	Enhancers	Stomach Mucosa	stomach
11	chr10:23697000-23706400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
12	chr10:23697200-23697800	Enhancers	Rectal Mucosa Donor 31	rectum
13	chr10:23697400-23697800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr10:23697600-23701000	Weak transcription	Skeletal Muscle Male	skeletal muscle

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links