Variant report

Variant	rs7078402
Chromosome Location	chr10:23792105-23792106
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs11013427	1.00[EUR][1000 genomes]
rs11013432	1.00[EUR][1000 genomes]
rs11013433	1.00[EUR][1000 genomes]
rs13328822	1.00[EUR][1000 genomes]
rs13328830	1.00[EUR][1000 genomes]
rs16923536	1.00[EUR][1000 genomes]
rs56984761	1.00[EUR][1000 genomes]
rs57142582	1.00[EUR][1000 genomes]
rs7077959	1.00[EUR][1000 genomes]
rs7085674	1.00[EUR][1000 genomes]
rs7101025	1.00[EUR][1000 genomes]
rs73602541	1.00[EUR][1000 genomes]
rs73602543	1.00[EUR][1000 genomes]
rs73602544	1.00[EUR][1000 genomes]
rs73602547	1.00[EUR][1000 genomes]
rs73602571	1.00[EUR][1000 genomes]
rs7921695	1.00[EUR][1000 genomes]
rs9651373	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831811	chr10:23734326-23913370	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23789200-23794600	Weak transcription	Pancreatic Islets	Pancreatic Islet

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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