The 2.0 version of rSNPBase

Variant report

Variant rs57050931
Chromosome Location chr5:79456189-79456190
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:79433600-79476600 Weak transcription Small Intestine intestine
2 chr5:79437600-79456200 Weak transcription HSMM muscle
3 chr5:79437600-79464000 Weak transcription Spleen Spleen
4 chr5:79437800-79471400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr5:79438600-79482600 Weak transcription Psoas Muscle Psoas
6 chr5:79439200-79456200 Strong transcription Fetal Stomach stomach
7 chr5:79439800-79458600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr5:79440200-79468200 Weak transcription NHDF-Ad bronchial
9 chr5:79441400-79456400 Strong transcription Primary hematopoietic stem cells short term culture blood
10 chr5:79442000-79487600 Weak transcription NH-A brain
11 chr5:79444000-79476800 Weak transcription Colonic Mucosa Colon
12 chr5:79444600-79465600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr5:79445800-79464600 Weak transcription Placenta Amnion Placenta Amnion
14 chr5:79446200-79464600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr5:79446200-79465200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr5:79447800-79458200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr5:79448000-79464600 Weak transcription Gastric stomach
18 chr5:79448200-79466400 Weak transcription Aorta Aorta
19 chr5:79448400-79464800 Weak transcription Primary B cells from peripheral blood blood
20 chr5:79449400-79464200 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr5:79449800-79456200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
22 chr5:79449800-79456200 Strong transcription Fetal Intestine Large intestine
23 chr5:79449800-79471400 Strong transcription Dnd41 blood
24 chr5:79450000-79461000 Strong transcription Primary T cells from cord blood blood
25 chr5:79450000-79461000 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr5:79450000-79461200 Weak transcription Stomach Mucosa stomach
27 chr5:79450000-79461400 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr5:79450000-79461600 Strong transcription Liver Liver
29 chr5:79450000-79461800 Weak transcription Fetal Brain Male brain
30 chr5:79450000-79464200 Weak transcription Colon Smooth Muscle Colon
31 chr5:79450000-79464600 Weak transcription Right Ventricle heart
32 chr5:79450000-79464800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr5:79450000-79464800 Weak transcription Stomach Smooth Muscle stomach
34 chr5:79450000-79466200 Strong transcription Fetal Thymus thymus
35 chr5:79450000-79469800 Weak transcription HSMMtube muscle
36 chr5:79450000-79477200 Weak transcription HMEC breast
37 chr5:79450000-79477600 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr5:79450400-79471200 Strong transcription Primary T regulatory cells fromperipheralblood blood
39 chr5:79450400-79472800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
40 chr5:79450600-79460800 Strong transcription Primary T helper cells fromperipheralblood blood
41 chr5:79450800-79456200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr5:79450800-79456200 Strong transcription Fetal Muscle Leg muscle
43 chr5:79450800-79473800 Strong transcription Rectal Mucosa Donor 29 rectum
44 chr5:79451400-79462400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr5:79451600-79456400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr5:79451600-79460000 Strong transcription Duodenum Mucosa Duodenum
47 chr5:79452000-79456200 Strong transcription Fetal Muscle Trunk muscle
48 chr5:79452000-79464400 Strong transcription Placenta Placenta
49 chr5:79452400-79456400 Strong transcription Primary B cells from cord blood blood
50 chr5:79452400-79458200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015