Variant report

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10006910	0.99[ASN][1000 genomes]
rs10033172	0.90[ASN][1000 genomes]
rs1613060	0.99[ASN][1000 genomes]
rs17025470	0.97[ASN][1000 genomes]
rs2358679	0.99[ASN][1000 genomes]
rs2358680	0.84[AFR][1000 genomes]
rs4240352	0.82[AFR][1000 genomes]
rs4835147	0.80[AFR][1000 genomes]
rs4835549	0.82[AFR][1000 genomes]
rs4835550	0.90[ASN][1000 genomes]
rs4835551	0.90[ASN][1000 genomes]
rs6535643	0.99[ASN][1000 genomes]
rs6535644	0.99[ASN][1000 genomes]
rs6535645	0.83[AFR][1000 genomes]
rs6827690	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6846355	0.82[AFR][1000 genomes]
rs6858768	0.81[AFR][1000 genomes]
rs756863	0.99[ASN][1000 genomes]
rs7668071	0.84[AFR][1000 genomes]
rs7678316	0.90[ASN][1000 genomes]
rs7678724	0.90[ASN][1000 genomes]
rs7682891	0.83[AFR][1000 genomes]
rs853699	0.99[ASN][1000 genomes]
rs853706	0.93[EUR][1000 genomes]
rs853710	0.96[ASN][1000 genomes]
rs853711	0.96[ASN][1000 genomes]
rs853713	0.96[ASN][1000 genomes]
rs853725	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs853727	0.99[ASN][1000 genomes]
rs853729	0.99[ASN][1000 genomes]
rs886148	0.96[ASN][1000 genomes]
rs997583	0.97[ASN][1000 genomes]
rs9996655	0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv461677	chr4:149794284-149903982	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv595686	chr4:149794284-149903982	Enhancers ZNF genes & repeats Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv470083	chr4:149817052-149903982	Weak transcription Enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:149834000-149844800	Weak transcription	Stomach Mucosa	stomach

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