The 2.0 version of rSNPBase

Variant report

Variant rs573083
Chromosome Location chr11:63452311-63452312
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:63449600-63455600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
2 chr11:63450400-63452400 Weak transcription Lung lung
3 chr11:63450400-63454000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr11:63450400-63454800 Weak transcription Gastric stomach
5 chr11:63450400-63455200 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr11:63450400-63456000 Weak transcription Placenta Placenta
7 chr11:63450400-63466400 Weak transcription Small Intestine intestine
8 chr11:63450600-63454200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr11:63450600-63454200 Weak transcription Fetal Muscle Trunk muscle
10 chr11:63450600-63469200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr11:63450800-63452400 Weak transcription Right Atrium heart
12 chr11:63450800-63454000 Weak transcription Psoas Muscle Psoas
13 chr11:63450800-63454200 Weak transcription Liver Liver
14 chr11:63450800-63460400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr11:63450800-63465400 Weak transcription H9 Cell Line embryonic stem cell
16 chr11:63450800-63465800 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr11:63450800-63517400 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr11:63451000-63452600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr11:63451000-63454400 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr11:63451000-63454600 Weak transcription Stomach Smooth Muscle stomach
21 chr11:63451000-63466800 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr11:63451000-63466800 Weak transcription Stomach Mucosa stomach
23 chr11:63451000-63467000 Weak transcription Thymus Thymus
24 chr11:63451200-63452400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr11:63451200-63452600 Enhancers Primary B cells from cord blood blood
26 chr11:63451200-63453000 Weak transcription Fetal Heart heart
27 chr11:63451200-63453200 Enhancers Primary monocytes fromperipheralblood blood
28 chr11:63451200-63453200 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr11:63451200-63454000 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr11:63451200-63454000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr11:63451200-63454200 Weak transcription Brain Hippocampus Middle brain
32 chr11:63451200-63454200 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr11:63451200-63454400 Weak transcription NHEK skin
34 chr11:63451200-63454400 Weak transcription Osteobl bone
35 chr11:63451200-63454600 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr11:63451200-63454600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr11:63451200-63454600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr11:63451200-63454800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr11:63451200-63455000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr11:63451200-63466400 Weak transcription Fetal Intestine Large intestine
41 chr11:63451200-63466800 Weak transcription Fetal Kidney kidney
42 chr11:63451200-63475000 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr11:63451200-63478000 Weak transcription HSMM muscle
44 chr11:63451200-63486400 Weak transcription Primary T cells from cord blood blood
45 chr11:63451400-63452400 Weak transcription iPS-15b Cell Line embryonic stem cell
46 chr11:63451400-63452400 Weak transcription Brain Substantia Nigra brain
47 chr11:63451400-63452600 Enhancers Primary hematopoietic stem cells short term culture blood
48 chr11:63451400-63452600 Weak transcription A549 lung
49 chr11:63451400-63452800 Weak transcription Brain Cingulate Gyrus brain
50 chr11:63451400-63453000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015