The 2.0 version of rSNPBase

Variant report

Variant rs57309175
Chromosome Location chr2:10817356-10817357
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:10756200-10828400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:10788000-10827400 Weak transcription Fetal Brain Male brain
3 chr2:10788400-10828000 Weak transcription Fetal Heart heart
4 chr2:10789000-10820600 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr2:10793800-10828000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr2:10794000-10823600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr2:10794600-10828200 Weak transcription Stomach Mucosa stomach
8 chr2:10794600-10828400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr2:10795200-10828800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr2:10797400-10823600 Weak transcription Psoas Muscle Psoas
11 chr2:10799200-10826000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr2:10799400-10823200 Weak transcription Brain Cingulate Gyrus brain
13 chr2:10799800-10823200 Weak transcription Colonic Mucosa Colon
14 chr2:10800200-10829200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr2:10802400-10828200 Weak transcription Brain Germinal Matrix brain
16 chr2:10802800-10823400 Weak transcription Brain Hippocampus Middle brain
17 chr2:10803600-10828600 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr2:10805000-10822800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr2:10805000-10823600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr2:10805000-10829200 Weak transcription Aorta Aorta
21 chr2:10806200-10821400 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr2:10806200-10828200 Weak transcription Brain Substantia Nigra brain
23 chr2:10806600-10823600 Weak transcription Ovary ovary
24 chr2:10806800-10822200 Weak transcription Thymus Thymus
25 chr2:10807400-10821600 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr2:10807600-10828000 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr2:10807800-10821400 Weak transcription Rectal Smooth Muscle rectum
28 chr2:10808200-10820600 Weak transcription Brain Anterior Caudate brain
29 chr2:10808200-10820600 Weak transcription Fetal Brain Female brain
30 chr2:10808200-10828000 Weak transcription Gastric stomach
31 chr2:10808200-10828400 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr2:10808400-10820400 Weak transcription Fetal Lung lung
33 chr2:10808400-10820400 Weak transcription HSMM muscle
34 chr2:10808400-10820800 Weak transcription Brain Angular Gyrus brain
35 chr2:10808400-10820800 Weak transcription Brain Inferior Temporal Lobe brain
36 chr2:10808400-10820800 Weak transcription NHDF-Ad bronchial
37 chr2:10808400-10821000 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr2:10808400-10828000 Weak transcription NHLF lung
39 chr2:10810200-10826600 Strong transcription Primary monocytes fromperipheralblood blood
40 chr2:10810400-10824800 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr2:10811200-10819000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr2:10811400-10821600 Weak transcription NHEK skin
43 chr2:10811600-10818400 Strong transcription Fetal Intestine Large intestine
44 chr2:10811600-10824800 Strong transcription HepG2 liver
45 chr2:10812000-10818400 Strong transcription Fetal Intestine Small intestine
46 chr2:10812200-10817800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr2:10812200-10818000 Weak transcription Primary B cells from cord blood blood
48 chr2:10812200-10820400 Weak transcription NH-A brain
49 chr2:10812200-10820600 Weak transcription Muscle Satellite Cultured Cells --
50 chr2:10812200-10820800 Weak transcription HMEC breast

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Last update: Aug 31, 2015