The 2.0 version of rSNPBase

Variant report

Variant rs59640725
Chromosome Location chr2:10824829-10824830
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:10756200-10828400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:10788000-10827400 Weak transcription Fetal Brain Male brain
3 chr2:10788400-10828000 Weak transcription Fetal Heart heart
4 chr2:10793800-10828000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr2:10794600-10828200 Weak transcription Stomach Mucosa stomach
6 chr2:10794600-10828400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr2:10795200-10828800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr2:10799200-10826000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr2:10800200-10829200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr2:10802400-10828200 Weak transcription Brain Germinal Matrix brain
11 chr2:10803600-10828600 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr2:10805000-10829200 Weak transcription Aorta Aorta
13 chr2:10806200-10828200 Weak transcription Brain Substantia Nigra brain
14 chr2:10807600-10828000 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr2:10808200-10828000 Weak transcription Gastric stomach
16 chr2:10808200-10828400 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr2:10808400-10828000 Weak transcription NHLF lung
18 chr2:10810200-10826600 Strong transcription Primary monocytes fromperipheralblood blood
19 chr2:10812400-10826400 Weak transcription Spleen Spleen
20 chr2:10812400-10827400 Weak transcription Esophagus oesophagus
21 chr2:10812400-10827400 Weak transcription Right Ventricle heart
22 chr2:10813200-10826400 Weak transcription H9 Cell Line embryonic stem cell
23 chr2:10813200-10827400 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr2:10813200-10828000 Weak transcription Lung lung
25 chr2:10813200-10828200 Weak transcription Small Intestine intestine
26 chr2:10813200-10828400 Weak transcription HSMMtube muscle
27 chr2:10813200-10829200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr2:10815000-10827600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr2:10816000-10826600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr2:10816400-10827400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr2:10816600-10826600 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr2:10816600-10826800 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr2:10816800-10826600 Strong transcription Primary hematopoietic stem cells short term culture blood
34 chr2:10817600-10825200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr2:10817600-10825800 Strong transcription Primary T cells fromperipheralblood blood
36 chr2:10817800-10825000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
37 chr2:10817800-10829400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr2:10818000-10825800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr2:10818400-10828200 Weak transcription Fetal Intestine Large intestine
40 chr2:10818600-10826400 Strong transcription Primary T helper cells fromperipheralblood blood
41 chr2:10819200-10828400 Weak transcription Placenta Amnion Placenta Amnion
42 chr2:10820400-10826400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr2:10820600-10827600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr2:10820800-10826400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr2:10821000-10827000 Strong transcription iPS-18 Cell Line embryonic stem cell
46 chr2:10821000-10827400 Weak transcription Muscle Satellite Cultured Cells --
47 chr2:10821000-10828600 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr2:10821200-10826400 Strong transcription Breast Myoepithelial Primary Cells Breast
49 chr2:10821600-10827800 Weak transcription Right Atrium heart
50 chr2:10821600-10828200 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015