Variant report

Variant rs57347378
Chromosome Location chr6:1895941-1895942
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:1851400-1909600 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr6:1877600-1915200 Weak transcription Primary T cells from cord blood blood
3 chr6:1886000-1896400 Weak transcription Esophagus oesophagus
4 chr6:1886200-1901400 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr6:1886200-1904000 Weak transcription Fetal Intestine Small intestine
6 chr6:1890600-1904000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr6:1890600-1911400 Weak transcription Primary hematopoietic stem cells blood
8 chr6:1891800-1914800 Weak transcription Colonic Mucosa Colon
9 chr6:1893400-1897000 Weak transcription HepG2 liver
10 chr6:1894200-1898200 Weak transcription Gastric stomach
11 chr6:1894200-1904000 Weak transcription Pancreas Pancrea
12 chr6:1895000-1896400 Enhancers HMEC breast
13 chr6:1895200-1896000 Enhancers Breast Myoepithelial Primary Cells Breast
14 chr6:1895200-1896000 Enhancers NHEK skin
15 chr6:1895200-1896200 Enhancers Hela-S3 cervix
16 chr6:1895200-1896600 Enhancers Aorta Aorta
17 chr6:1895200-1897400 Enhancers Stomach Mucosa stomach
18 chr6:1895400-1896200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr6:1895400-1896400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr6:1895400-1896600 Enhancers Duodenum Mucosa Duodenum
21 chr6:1895400-1896600 Enhancers Osteobl bone
22 chr6:1895400-1897400 Enhancers Sigmoid Colon Sigmoid Colon
23 chr6:1895600-1896400 Enhancers Rectal Mucosa Donor 29 rectum
24 chr6:1895600-1896400 Enhancers NH-A brain
25 chr6:1895800-1896400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr6:1895800-1896400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr6:1895800-1904000 Weak transcription Fetal Muscle Leg muscle
28 chr6:1895800-1910800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr6:1895800-1911200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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